技术与方法 |
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可视化突变建模、定点突变和表达超耐热菌D-乳酸脱氢酶 |
田晋红1,2,3, 刘琦2, 战丽萍2, 周泽扬1,4 |
1. 西南大学蚕学与系统生物学研究所 重庆 400716;
2. 西南大学药学院 重庆 400716;
3. 重庆市兽药工程技术研究中心 重庆 400716;
4. 重庆师范大学生命科学学院 重庆 400047 |
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Visualization of Mutation to Structure Homologous Modeling, Site-Directed Mutagenesis and Express D-Lactate Dehydrogenase from Aquifex aeolicus |
TIAN Jin-hong1,2,3, LIU Qi2, ZHAN Li-ping2, ZHOU Ze-yang1,4 |
1. Institute of Sericulture and Systems Biology,Southwest University,Chongqing 400716,China;
2. College of Pharmaceutical Sciences,Southwest University,Chongqing 400716,China;
3. Chongqing Engineering Technology Research Centre of Veterinary Drugs,Chongqing 400716,China;
4. College of Life Science,Chongqing Normal University,Chongqing 400047,China |
引用本文:
田晋红, 刘琦, 战丽萍, 周泽扬. 可视化突变建模、定点突变和表达超耐热菌D-乳酸脱氢酶[J]. 中国生物工程杂志, 2012, 32(05): 73-78.
TIAN Jin-hong, LIU Qi, ZHAN Li-ping, ZHOU Ze-yang. Visualization of Mutation to Structure Homologous Modeling, Site-Directed Mutagenesis and Express D-Lactate Dehydrogenase from Aquifex aeolicus. China Biotechnology, 2012, 32(05): 73-78.
链接本文:
https://manu60.magtech.com.cn/biotech/CN/
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https://manu60.magtech.com.cn/biotech/CN/Y2012/V32/I05/73
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[1] Hummel W, Schiitte H, Kula M R. Large scale production of D-lactate dehydrogenase for the stereospecific reduction of pyruvate and phenylpyruvate. Europen Journal of Applied Microbiology and Biotechnology, 1983, 18: 75-85.
[2] Antonyuk S V, Strange R W, Ellis M J, et al. Structure of D-lactate dehydrogenase from Aquifex aeolicus complexed with NAD+ and lactic acid (or pyruvate). Epub,2009, 65(12): 1209-1213.
[3] Nielsen M, Lundegaard C, Lund O. et al. CPHmodels-3.0 - Remote homology modeling using structure guided sequence profiles.Nucleic Acids Research, 2010, 38(10):576-581.
[4] Lund O, Nielsen M, Lundegaard C, et al. CPHmodels 2.0: X3M a Computer Program to Extract 3D Models. Abstract at the CASP5 conferenceA102, 2002,1-5:A102.
[5] Zheng L,Baumann U,Reymond J L.An eficient one-step Site-directed and site-saturation mutagenesis protocol. Nucleic Acids Res, 2004,32: e15(1-5).
[6] 高川,韩维涛,宋云扬,等. 一种改进的快速PCR定点突变技术.生物技术通报, 2006, 3:99-103. Gap C, Han W T, Song Y Y, et al. A technique of improved rapid site-directed mutagenesis. Biotechnology Bulletin, 2006, 3:99-103.
[7] 周亚芹,张洪梅,董艳,等.环状定点诱变技术在单碱基定点诱变中的应用.现代医学,2009,37:321-324. Ahou Y Q, Zhang H M,Dong Y, et al. Site-directed mutagenesis of single base in vitro using circularsite-directed mutagenesis technology.Modern Medical Journal,2009,37:321-324.
[8] Binay B,Karaguler N G. Attempting to remove the substrate inhibition of L-lactate dehydroge-nase from Bacillus stearothermophilus by site-directed mutagenesis. Appl Biochem Biotechnol,2007,141(2-3):265-272.
[9] Liu H,Naismith J H.An eficient one-step site- directed deletion,insertion,single and muhiple- site plasmid mutagenesis protocol.BMC Biotecbnol,2008,8:91(1-10).
[10] Qi D,Schohhof K B.A one-step PCR-based method for rapid and eficient site-directed fragment deletion,insertion,and substitution mutagenesis. Virol Methods,2008,149:85-90.
[11] 张宝中,冉多良,刘大斌,等.利用DREAM设计和同源重组进行一步定点突变.中国生物工程杂志,2008,28(11):77-81. Zhang B Z,Ran D L,Liu D B, et al. One-step site-directed mutagenesis based on homologous recombination and DREAM design.China Biotechnology,2008,28(11):77-81.
[12] Zhou S D, Shanmugam K T, Ingram L O. Functional Replacement of the Escherichia coliD-(-)-Lactate Dehydrogenase Gene (ldhA) with the L-(+)-Lactate Dehydrogenase Gene (ldhL) from Pediococcus acidilactici.Appl.Environ.Microbio1,2003,69:2237- 2244.
[13] 贾江花,沐万孟,张涛,等.重组L-乳酸脱氢酶在大肠杆菌中的表达、纯化及活性研究.食品与发酵工业,2009,35(5):116-119. Jia J H,Mu W M,Zhang T, et al. Overexpession and purification of phenylactic acid producing lactate dehydrogenase gene (IdhL) in E. coli. Food Ferm Ind,2009,35(5):116-119.
[14] 李兴峰, 江波, 潘蓓蕾, 等.苯丙氨酸及苯丙酮酸对Lactobacillus sp. SK007合成苯乳酸的影响. 过程工程学报, 2007, 7(6): 1202-1206. Li X F, Jiang B, Pan B L, et al. Effects of phenylalanine and phenylpyruvic acid on biosynthesis of phenyllactic acid with Lactobacillus sp.Chin J Proc Eng, 2007, 7(6): 1202-1206.
[15] 沐万孟,周宏敏, 刘凤丽, 等.苯乳酸的快速检测研究.食品发酵工业,2008,34(11):139-142. Mu W M,Zhou H M,Liu F L, et al. Rapid determination of phenyllactic acid.Food Ferm Ind,2008,34(11):139-142.
[16] Xia Z X, Mathews F S, Molecular structure of flavocytochrome b2 at 24 resolution. Mol Biol, 1990, 212(4):837-863.
[17] Daff S, Manson F D C, Reid G A, et al. Strategic manipulation of the substrate specificity of Saccharomyces cerevisiae flavocytochrome b2. Biochem,1994,301: 829-834.
[18] Sinclair R, Reid G A,Chapman S K. Re-design of Saccharomyces cerevisiae flavocytochrome b2: introduction of L-mandelate dehydrogenase activity. Biochem, 1998, 333:117-120.
[19] Mowat C G, Wehenkel A, Green A J, et al. Altered substrate specificity in flavocytoch -rome b2: structural insights into the mechanism of L-lactate dehydrogenation. Biochem, 2004, 43(29):9519-9526.
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