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中国生物工程杂志

CHINA BIOTECHNOLOGY
中国生物工程杂志  2020, Vol. 40 Issue (8): 19-23    DOI: 10.13523/j.cb.2005033
技术与方法     
单引物PCR法引入定点突变 *
彭向雷,王烨,王丽男,苏彦斌,付远辉,郑妍鹏,何金生()
北京交通大学生命科学与生物工程研究院 北京 100044
Single-Primer PCR for Site-Directed Mutagenesis
PENG Xiang-lei,WANG Ye,WANG Li-nan,SU Yan-bin,FU Yuan-hui,ZHENG Yan-peng,HE Jin-sheng()
College of Life Sciences & Bioengineering, Beijing Jiaotong University, Beijing 100044, China
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摘要:

目的:利用单个突变引物,在含人呼吸道合胞病毒F蛋白基因编码序列的pcDNA3.1(+)-F质粒中,通过单次环形PCR在特定序列位置引入定点突变。 方法: 以双链环状的pcDNA3.1(+)-F质粒DNA为模板,设计分别含有三种目的突变N70Q, I431N, Q270T的三条单引物,分别进行单次PCR。用甲基化DNA特异的限制性内切酶Dpn I处理PCR产物后转化大肠杆菌DH5α,进行克隆筛选,酶切鉴定和测序分析。 结果: 酶切鉴定结果和测序结果均符合预期,利用单引物PCR法成功在含人呼吸道合胞病毒F蛋白基因编码序列的pcDNA3.1(+)-F质粒DNA 中引入了单碱基突变、两个间隔碱基突变及相邻三碱基突变三种目的突变。 结论: 单引物PCR法解决了常规定点突变方法中多个PCR反应,程序繁琐及突变效率低等问题,是一种简便、快速、有效的基因工程定点突变新方法。

关键词: 定点突变单引物PCR基因工程    
Abstract:

Objectives: To introduce site-directed mutagenesis into the pcDNA3.1(+)-F plasmid containing respiratory syncytial virus F gene coding sequence by single circular PCR using single primer. Methods: First, three single-stranded primers with mutagenesis N70Q, I431N or Q270T were designed according to the template pcDNA3.1(+)-F plasmid, respectively. Second, once-single PCR with the double-stranded DNA template and each of the three single primers was performed. Next, the PCR products were treated with endonuclease Dpn I to eliminate the methylated template DNA and then transformed into E. coli DH5α. Finally, plasmids were extracted from the culture of the selected positive clones and sent for sequencing after digestion identification. Results: The results of enzymatic digestion and sequencing analysis were as expected. Three types of site-directed mutagenesis were successfully introduced, namely ‘_X_’, ‘X_X’, ‘XXX’ when ‘X’ means mutated nucleotide and ‘_’ means the opposite. Conclusions: Single-primer PCR is a simple, quick and effective innovation to introduce site-directed mutagenesis, which solved the problems of multiple PCRs, complicated procedures and low effectiveness in previous methods.

Key words: Site-directed mutation    Single primer    PCR    Gene engineering
收稿日期: 2020-05-17 出版日期: 2020-09-10
ZTFLH:  Q291  
基金资助: * 国家自然科学基金(81771777)
通讯作者: 何金生     E-mail: jshhe@bjtu.edu.cn
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引用本文:

彭向雷,王烨,王丽男,苏彦斌,付远辉,郑妍鹏,何金生. 单引物PCR法引入定点突变 *[J]. 中国生物工程杂志, 2020, 40(8): 19-23.

PENG Xiang-lei,WANG Ye,WANG Li-nan,SU Yan-bin,FU Yuan-hui,ZHENG Yan-peng,HE Jin-sheng. Single-Primer PCR for Site-Directed Mutagenesis. China Biotechnology, 2020, 40(8): 19-23.

链接本文:

https://manu60.magtech.com.cn/biotech/CN/10.13523/j.cb.2005033        https://manu60.magtech.com.cn/biotech/CN/Y2020/V40/I8/19

引物名称 引物序列(加粗字体处为引入的突变碱基)
N70Q 5'-CATCAAGAAAATCAAGTGCCAGGGCACCGACGCCAAG-3'
I431N 5'-GAACCGGGGCATCAACAAGACCTTCAGCAAC-3'
Q270T 5'-GCCCATCACCAACGACACCAAAAAGCTGATGAGCAACAAC-3'
表1  RSV F定点突变引物序列
成分名称 用量
模板pcDNA3.1(+)-F 50ng
引物 125ng
10mmol/L dNTPs 1μl
5×Q5反应缓冲液 10μl
Q5高保真DNA聚合酶 0.5μl(1U)
无核酸酶水 补齐至50μl
表2  PCR反应体系
步骤 温度 时间
预变性 98℃ 30s
15~20循环 98℃ 10s
72℃ 4min
终延伸 72℃ 5min
保持 4℃ forever
表3  PCR 反应条件
图1  单引物单次PCR法引入定点突变流程图
图2  在RSV F基因中引入N70Q, I431N, Q270T定点突变酶切鉴定结果图
图3  三种定点突变正确测序结果图(红色框线代表成功突变位点)
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