25 January 2013, Volume 33 Issue 1
    

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  • XU Ying-chen, GUAN Li-dong, ZHOU Jun-nian, ZENG Quan, YUAN Hong-feng, LI Si-ting, GUAN Zhao-xuan, HE Li-juan, NAN Xue, CHEN Lin, YUE Wen, PEI Xue-tao
    China Biotechnology. 2013, 33(1): 1-7.
    Abstract ( ) Download PDF ( )   Knowledge map   Save
    The aim of the study is to isolate and identify liver cancer stem cells and screen the differentially expressed microRNAs. CD90+ cells were confirmed the existence in eight hepatocellular carcinoma cell lines and specimens by flow cytometry and immunofluorescence. Next, CD90+ cells isolated from MHCC97-H cell line by MACS. Drug chemoresistance assay showed CD90+ cells have a stronger drug resistance capacity than CD90- cells. CD90+ cells also have a stronger ability to initiate tumor formation than CD90- cells in a xenograft model in nude mice. Taken together, liver cancer stem cells may be enriched in CD90+ populations. Therefore, we examined the differentially expressed microRNAs between CD90+ cell and CD90- cells by means of microRNA chip. It is revealed that 92 microRNAs are differentially expressed between CD90+ cell and CD90- cells, of which 52 microRNAs are highly expressed in CD90+ cells and 40 microRNAs are highly expressed in CD90- cells.
  • GUO Li-li, OU Xia, MI Kai, SUN Mao-sheng, LI Hong-jun
    China Biotechnology. 2013, 33(1): 8-13.
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    Enterovirus type (EV71) is an etiologic agent responsible for seasonal epidemics of hand-foot-and-mouth disease and causes outbreaks with significant mortality among young children. Expression of enterovirus EV71 Virus-like Particles(VLP) in Bac-to-Bac Baculovirus Expression System and evaluated its immunogenicity. Recombinant AcMNPV-P1-3CD was obtained by transfecting the Bacmid-P1-3CD into the insect cell line of Sf9. The expressed protein was analyzed by IFA, Western blot methods and electron microscope obseruation, The VLPs of EV71 were observed by Electron microscope, while its immunogenicity was measured by ELISA and Microneutralization. The result reveals that EV71 VLP expressed by Recombinant AcMNPV-P1-3CD has strong immunogenicity, which is helpful for the development of the vaccine against EV71 infection.
  • HUANG Peng-huang, WANG Ze, TIAN Hai-shan, ZHAO Hai-yang, LI Hai-yan, LI Xiao-kun
    China Biotechnology. 2013, 33(1): 14-19.
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    FGF8b, which belongs to the fibroblast growth factor family, has been found to be associated with the regulation of growth and progression of hormonal cancers. Thus, it is believed that FGF8b could be a potential target in the treatment of hormonal cancers. To improve the production of recombinant hFGF8b to meet the increasing demand in basic research and clinical applications, an artificial gene encoding its mature peptide sequence was constructed and cloned into vector pET-3a. Then the recombinant proteins were expressed and presented in form of inclusion bodies in Escherichia coli BL21(DE3)pLysS. Expression, purification and renaturation conditions of the recombinant proteins were optimized. The preliminary biochemical characterization of FGF8b was further confirmed by Western blotting, and its mitogen activity was tested through MTT assay. In summary, this study has successfully acquired active recombinant FGF8b protein, which can be used for the further clinical development of embryology and the basic hormonal cancer researches.
  • WANG Sheng, CAO Min, DONG Jie, MU Hong-zhen, DING Guo-ping, ZHANG Hong
    China Biotechnology. 2013, 33(1): 20-26.
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    To gain insights into the function of the conserved residues in the C-terminal of the Cucumber mosaic virus (CMV) -encoded silencing suppressor protein 2b, the 2b protein of Q-CMV, a subgroup II isolate, and 2bdelC, a C terminal truncated mutant of Q 2b, were individually constructed into plant expression vectors. Those two vectors were co-delivered into Tobacco plants(Nicotiana benthamiana)with a Potato virus X-derived expression vector (PVXdt-GFP) by means of an agrobacterium-mediated transient transformation assay and then analyzed for their silencing suppressor activities. Western blotting was performed to monitor the protein level of 2b and its mutants. The results showed that the truncation did not alter the accumulation of Q 2b protein in plant cell and this indicated that the C-terminal residues are not crucial for the stability of 2b protein in vivo. We further show that the co-expressed GFP have indistinguishable expression levels in the presence of Q 2b protein or the Q 2b C-terminal mutant. The results implicate the C-terminal residues neither have effect on the suppressor activity nor contain any small RNA binding domains.
  • TAO Feng-yun, YIN Xue-wei, LI Dan, JIANG Dan, ZHAO Wei
    China Biotechnology. 2013, 33(1): 27-32.
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    Much attention has been paid to ribonucleases from amphibian Rana species for their significant anti-tumor activity. Rdrlec is a novel RNase gene form Rana dybowskii and its biological function has not been identified. Getting a great deal of high purity wild type recombinant protein is the basis for its function study. Rdrlec gene was adjusted according to Escherichia coli codon bias without changing its amino acids. The synthetic gene was inserted to the pET-32a (+) expression vector through the EcoR I and Hind III site, and the resulting recombination expression plasmid was named pET32-Rdrlec and transferred into Escherichia coli BL21 (DE3) strains. After induced with 0.4 mmol/L IPTG at 30℃ for 6 h, the fusion protein was found expressed mainly in soluble form. The cell lysate was loading to Ni-NTA affinity chromatography and Sephadex G75 chromatography, and the fusion protein showed a single band on SDS-PAGE. The wild type recombinant Rdrlec protein was released and purified after enterokinase digesting, and it showed enzymatic activity to degrade RNA into nucleotides, which shows that this molecule has formed the correct spatial structure. The successful expression of wild type recombinant Rdrlec protein has providing the raw material for the subsequent structure, function and application study.
  • FENG Yuan-hang, WANG Gang, JI Jing, GUAN Chun-feng, JIN Chao
    China Biotechnology. 2013, 33(1): 33-40.
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    Proline is the important osmotic regulation substances in plants and plays a critical role in improving the stress tolerance of plants. The materials is Lycium chinense Miller,which proline content changes significantly after salt stress. After 1.5% NaCl stress, full length cDNA sequence of a putative Δ1-pyrroline-5-carboxylate synthase gene(P5CS)was cloned from Lycium chinense Miller leaves using RT-PCR and 3’rapid amplification of cDNA ends(RACE),named LmP5CS, and construct expression vector pH7m24GW,3rc -LmP5CS. Sequence analysis showed that the complete open reading frame (ORF) of this gene is 2154 bp, encoding for a protein of 717 amino acids with an isoelectric point of 6.07 and a molecular weight of 77.5 kDa.After 200 mmol/L NaCl stress, protein expression level increased at first and decreased subsequently, proline content changed in accordance with that. The semi-quantitative PCR result suggests that LmP5CS plays an important role in proline content change responses to salt stress.
  • LI Mei-yu, LI Rui, YU Min, WANG Sheng-hua, CHEN Fang
    China Biotechnology. 2013, 33(1): 41-46.
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    A perennial herbaceous plant, Pogonatherum paniceum, plays an important role inecological restoration and landscape construction. To establish highly efficient transformation system, factors which influenced transformation including Agrobacterium concentration, infection time, concentration of acetosyringone and glucose, and co-culture time were studied with the mature embryo callus of Pogonatherum paniceum based on the variance of GUS (β-glucuronidase) trsnsient expression rate. The results showed that the transformation efficiency was improved with Agrobacterium concentration of OD600=0.6, incubation for 10 min, co-culture time for 5d. Acetosyringone with the concentration of 20mg/L and 10g/L glucose could significantly enhance the transformation rate. Utilizing this system, more than 57% kanamycin resistance selection efficiency was obtained. GUS gene has successfully integrated into the plant genome by GUS and PCR detection. The establishment of this transformation system lays a foundation for genetic modified and study of functional genes of Pogonatherum paniceum.
  • ZHANG Zhan-sheng, LI Yan-xu, DU Qing-ping, XIA Li-juan
    China Biotechnology. 2013, 33(1): 47-52.
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    By gradually increasing the concentration of BTEX in the culture medium with toluene, benzene and xylene as the sole carbon source, a BTEX-degrading fungi strain which was designated as B1 was isolated from the sludge of sewage treatment plant. Using single factor and orthogonal experiment analyzed and studied the fungal degradation environment effect factors and degradation efficiency. The results showed that the optimum condition of fungal degradation was C:N = 5:1, pH5, temperature 30℃, strains inoculation amount 5.5ml (50ml culture medium). GC analysis was used to determine the fungal degradation effect to BTEX with the initial liquid phase concentration of 0~90mg/L, the results showed that the degradation activities of fungal strain was not inhibited, and the fungal degradation efficiency was toluene > benzene > xylene, the highest degradation efficiency reached 87.39%, 85.21%, 81.47%,respectively. The degradation efficiency of mixed substrates was slightly higher than single substrate.
  • CHEN Xu-sheng, REN Xi-dong, ZENG Xin, DONG Nan, MAO Zhong-gui
    China Biotechnology. 2013, 33(1): 53-59.
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    To investigate the process of ε-poly-L-lysine (ε-PL) production from precursor L-lysine under different culture conditions of Streptomyces sp. M-Z18, it has developed conversion of precursor L-lysine for ε-PL production, combined with two-stage culture method, and with fermentation from glycerol, respectively. The results of experiment showed that two-stage culture method was used for conversion L-lysine to ε-PL and attained at 15 g/L with biotransformation of 3 g/L L-lysine; Furthermore, ε-PL production from glycerol fermentation coupled with L-lysine conversion achieved 33.76 g/L ε-PL and enhanced ε-PL productivity at 37.8%, compared with L-lysine-free fermentation. It was demonstrated that ε-PL production could be derived from precursor L-lysine, however, the efficiency of this conversion is needed further improved. It has indicated that the limit of ε-PL production is the biosynthesis of L-lysine in primary metabolism. Meanwhile, the results presented here provide a guidance for the ε-PL-producing strains primary metabolism improvement by metabolic engineering, and an efficient approach to enhancement of ε-PL production in scale fermentation.
  • TIAN Wen-hong, HU Jian-yang, DONG Xiao-yan, LI Ming-hao, WU Xiao-bing
    China Biotechnology. 2013, 33(1): 60-66.
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    Biosensors were developed to detect miRNA activity in the liver of mouse. And miR-21 activity was assayed in normal mouse liver. A plasmid DNA based miRNA sensor (Dsensor) was designed for detection of miRNA activity. Control Dsensor carrying no miRNA target and three miRNA Dsensors (miR-122, miR-206, and miR-21) with a perfect complementary target were constructed using molecular cloning method in this study. Then Control Dsensor was injected into mouse by hydrodynamic method through tail-vein and Fluc activity was assayed for different tissues to validate specific transduction into liver for hydrodynamic injection. Subsequently, with miR-122 Dsensor as positive control and miR-206 Dsensor as negative control, Control, miR-122, miR-206, and miR-21 Dsensors were separately hydrodynamic injected into normal mice. Blood was taken from the tail-vein and Gluc activity was assayed at different time points. 10 d later, mice were sacrificed and Fluc activity was assayed in the liver. Gluc activity for miRNA Dsensor was compared with that for Control Dsensor. The ratio of Gluc activity (G) to Fluc activity (F) (G/F) for each Dsensor was computed and compared at 10 d. The ratio of G/F value for Control Dsensor to that for miRNA Dsensor was further computed which was nominated as relative inhibiting fold (RIF) to indicate miRNA activity. Lastly miR-21, miR-122, and miR-206 expression levels were detected by QRT-PCR. Results demonstrated that Fluc was primarily expressed in liver and that Gluc activity for miR-122 and miR-21 Dsensor were less than that for Control Dsensor while Gluc activity for miR-206 was as much as that for Control Dsensor. G/F values were similar to Gluc activity. RIF values for miR-21, miR-122, and miR-206 were separately 80.03?21.25, 29.90?5.90, and 0.92?0.29, suggesting that miR-21 activity was higher than miR-122 activity while miR-206 activity was not detected in normal mouse liver. However, expression level of miR-21 was lower than that of miR-122 by QRT-PCR, indicating that miR-21 expression level did not authentically reflect its expression level. In conclusion, the method for detection of miRNA activity in mouse liver was successfully established and it was firstly found that miR-21 activity was higher than miR-122 while less expression of miR-21 compared with miR-122 in normal mouse liver, which indicated important functions of miR-21 for normal liver and provided a basis for further miR-21 research in mouse liver.
  • LIU Bin, LIU Xin, LI Shan, HE Hong-qiu, ZHANG Xiao-yi, TAN Jian-jun, CHEN Wei-zu, WANG Cun-xin
    China Biotechnology. 2013, 33(1): 67-71.
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    HIV-1 integrase is an ideal target for anti-HIV-1 drug discovery. The aim of the present study was to develop a highly effective and more convenient screening assay for HIV-1 integrase inhibitors targeting strand transfer. First, the recombinant expression vector pNL-IN, which contains the HIV-1 integrase gene, was transformed into E. coli BL21 (DE3) competent cells for prokaryotic expression. The recombinant integrase protein was purified by affinity chromatography. It was validated that the recombinant integrase protein was pure and active for screening assay development. Then, the biotin-labeled donor DNA and the FITC-labeled target DNA were synthesized and applied in the assay, and streptavidin-coated magnetic beads were used to capture the product DNA in the reaction system. Finally, the fluorescence signal was detected by a fluorescence microplate reader for the calculation of sample activity. Two reported integrase inhibitors, S-1360 and MK-0518, were tested to validate the screening assay, and the results are in accordance with previous studies, which indicated that the screening assay could be used for the screening of integrase inhibitor targeting strand transfer. The screening assay for HIV-1 integrase inhibitors developed in the present study is more convenient, time-saving and cost-effective than previous screening assays.
  • KANG Ke-ren, WU Pei-dian, HUANG Qi-lin, LI Yue-lin, LI Gao-hui, TANG Shi-xing, WANG Ji-hua
    China Biotechnology. 2013, 33(1): 72-78.
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    AIM: To develop and characterize monoclonal antibodies (mAb) against human heart type fatty acid binding protein (H-FABP); To develop a rapid lateral flow immunoassay for detecting H-FABP in plasma using the identified mAbs. Methods: BALB/c mice were immunized with H-FABP. The hybridoma cells were generated by fusing spleen cells and myeloma cells SP2/0 followed by screening and clonally selecting. The mAbs were purified from ascites and characterized by indirect ELISA and Western Blot, and were used for developing a rapid lateral flow immunoassay.Results: Twelve hybridoma cell lines were found to secret anti-H-FABP with high titers, specificity and affinity. Among them, the antibody pair of 3D1 and 5F4 were used as conjugate and coating antibody, respectively, in lateral flow immunoassay. The newly developed assay was used to detect 203 patients plasma. A 100% consistence was observed when compared with the reference kit.Conclusion: Two mAbs against H-FABP with high titers, specificity and affinity were obtained. The rapid lateral flow immunoassay was successfully developed for sensitive and specific detection of H-FABP in human plasma by using these mAbs.
  • QIU Pei-ran, HU Fang, LIN Ying, MENG Qing
    China Biotechnology. 2013, 33(1): 79-83.
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    Intein-mediated protein splicing is a brand new solution for protein artificial modification, thus possessing broad application foreground in protein engineering. So far, most inteins present low splicing efficiency in heterogeneous protein which highly limited the intein development and application. In order to develop an high throughput screening system for intein directed-evolution, the Bsa I enzyme was utilized to insert Ter ThyX intein(TX intein) coding sequence into kanamycin resistance protein sequence. Kanamycin screening system can combine the intein-splicing and kanamycin resistance, which is proved by the kanamycin plate assay and Western blot assay. This is an extein free screening system, which is capable of screening the splicing activity and the versatility at the same time. The spliced intein can be screened simply by picking the clone that can survive on the kanamycin plate. The screening system proved to be an efficiency, stable screening system.
  • CHEN Jie, WEI Hong-gang, LUO Yuan-chan, ZHANG Dao-jing, LI Shu-lan, TIAN Li, LI Yuan-guang
    China Biotechnology. 2013, 33(1): 84-89.
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    The new antifungal cyclic lipopeptide Marinhysin (MA) produced by Bacillus marinus B-9987 shows the excellent activity against plant pathogens both in vitro and in vivo. In the present study, the response surface methodology (RSM) was employed to optimize the medium composition for producing MA. The results of the Plackett-Burman design showed that sucrose and yeast powder had significant effects on MA production. The central composite design was applied to further optimize the concentration of sucrose and yeast powder in the medium. The results of analysis suggested that the optimum values of the tested variables were sucrose of 42.0 g/L and yeast powder of 42.3 g/L. MA concentration reached 75.74 mg/L, which was in agreement with the predicted value of 68.19mg/L. In comparison to the production of original level (54.12mg/L) in a 250ml flask, 1.28-fold increment had been obtained. By scaling u Pthe fermentation from flask to a 5L fermentor with the optimal medium, MA concentration was increased to 182mg/L, which was 1.28 times of the value (130mg/L) with the original medium.
  • WANG Jian-hua, GUO Ze-qin
    China Biotechnology. 2013, 33(1): 90-94.
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    Peptide nucleic acid (PNA) is a nucleic acid mimic in which the deoxyribose phosphate backbone has been replaced by a pseudo-peptide polymer to which the nucleobases are linked. PNA forms complexes with DNA following the Watson-Crick base-pairing rules. The PNA-DNA complexes exhibited high thermal stability and mismatch sensitivity. The high stability of these hybrids has been explained by the absence of negative charges along the PNA backbone. Furthermore, PNA is resistant to biological degradation and can bind complementary RNA or DNA sequences with extraordinary high affinity and specificity. PNA possesses many of the properties desired for a good antisense agent or antigene drugs, such as the detection of a single base mutate in nucleic acids, the diagnosis and detection by PCR molecular beacon, quantitative analysis of fluorescence in situ hybridization, genechip and biosensor technology and so on. Thus, the above-mentioned applications of PNA in molecular biotechnology in recent years and the prospect of its application were summarized.
  • YUAN Li, DAI He-ping
    China Biotechnology. 2013, 33(1): 95-103.
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    As the most well-known native binding proteins, antibodies with binding ability to antigen are extensively used in biotechnological and medical applications for over one hundred years. However, the intrinsic limitations of antibodies restrict its applications in many fields. Artificial binding proteins not only have the properties of antibodies, but also are possess of more advantages: smaller size, higher stability, E. Coli production with high throughput and high solubility, ease of modification, high affinity and high specificity, no IP conflict with antibody, therefore it was also called as ideal "the next generational antibody". Artificial binding proteins were selected from protein scaffolds library which was constructed by gene engineering based on stable protein scaffolds. This review will focus on following points: the concept and design of protein scaffold, classify of protein scaffolds, screening technologies of artificial binding proteins based on protein scaffold and application and development of artificial binding proteins.
  • ZHANG Huan, HUANG Si-chao, CAI Shao-hui
    China Biotechnology. 2013, 33(1): 104-108.
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    The construction of multicistronic vectors is important for biotechnology, especially for disease therapy. However, there are some limitations of the commonly used vectors such as limited capcity of vectors, imbalance of protein expression, low activity of protein or limited in the same subcellular space. 2A peptide has been used for construction of multicistronic vectors in recent years. Vectors containing 2A peptide definitely outweigh other construction strategies. The resource of 2A peptide, cleave mechanism, biological character, the relationship with protein targeting and application are reviewed.
  • SONG Yun, QIAO Yong-gang, LI Gui-quan
    China Biotechnology. 2013, 33(1): 109-113.
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    Zinc finger nucleases (ZFNs) typically consist of three to four zinc fingers (ZFs) and the non-specific DNA-cleavage domain of the restriction endonuclease FokⅠ. In this configuration, the ZFs constitute the binding module and the FokⅠ domain the cleavage module. ZFNs offer a general way to deliver a targeted site-specific double strand break (DSB) to the genome. DSBs are mainly repaired by two pathways, non-homologous end joining (NHEJ) and homologous recombination (HR), which targeted mutagenesis will be generated. In this review, we are first describe the structure of ZFNs, and ZFN-mediated targeted genome engineering via HR and NHEJ,and the methods of construct novel ZFNs and the steps of ZFN-mediated gene targeting. Then we mainly explore that ZFNs were used in plants.
  • LUO Li, HE Yong-zhi, ZHANG Yong-xia, WANG Ming-rong
    China Biotechnology. 2013, 33(1): 114-121.
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    Expression of heterologous genes in prokaryotic cell is a fast, simple and cheap way to produce large amount of target proteins, especially recombinant protein drugs. However, overexpression of recombinant protein often leads to the formation of aggregates called inclusion bodies(IBs). In the past,IBs were recognized as deposits of misfolded and inactive proteins, and denaturation/renaturantion steps is necessary for isolation of biologically active protein. Until recently, IBs have been described as biological activity, which can be extracted from non-denaturing conditions, named non-classical Inclusion bodies(ncIBs). This review which focuses on the definition, mechanism and extraction of ncIBs is expected to provide valuable references for the research and exploit of recombination protein productions.
  • QIAN Long, TANG Li-wei, HUANG Shu-shi, Chagan Irbis
    China Biotechnology. 2013, 33(1): 122-127.
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    As the third-generation biofuel, the bioethanol from macroalgae biomass fermentation have received widespread attention. However, the present ethanol industry strains were not able to utilize alginate that is the main ingredient in seaweed. This is one of the major technical difficulties to impede to achieve the industrial production of alginate bio-ethanol. In recent years, the cleavage enzyme and alginate degrading bacteria metabolic pathways have been studied in depth. The researchers constructed different alginate fermentation strains, and provided a viable technological support for the efficient conversion from alginate to bio-ethanol. This article reviewed resource profile of alginate and the scientific issues of bioethanol production by fermentation with alginate.
  • CAO Li-rong
    China Biotechnology. 2013, 33(1): 128-135.
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    In regard to the nature of the patent law, the aim of gene patent is to promote the gene research and its related technological innovation as well. However, the issue of gene patent has been controversial since its advent. Especially,The Myriad patents have prompted strong reaction in the jurisdiction of America, Europe as well as Australia. It is not uncommon that the 2011 Myriad case in America then brought about different points of view concerning the isolated DNA sequence. The district court held that Myriad’s composition claims to "isolated" DNA molecules cover patent-ineligible products of nature under §101 since the molecules as claimed do not exist in nature. However United States Court of Appeals Federal Circuit reversed the district court’s decision and held that isolated DNA molecules qualified as patentable subject matter because the claim is not to a hitherto unknown natural phenomenon, but to a nonnaturally occurring manufacture or compositon of matter——a product of human ingenuity "having a distinctive name, character and use". But it still reflects a state of uncertainty on patentability of isolated DNA. This paper then justifies gene patent and analyzes substantial requirements of gene patent in patent examination of America.