25 February 2014, Volume 34 Issue 2
    

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  • XIE Li, WANG Xiao-nan, LI Yang, YAN Min, CAO Yin, LI Hong-jun, SUN Mao-sheng
    China Biotechnology. 2014, 34(2): 1-6. https://doi.org/10.13523/j.cb.20140201
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    Objective:To construct a recombinant adenovirus expressing the non-structure protein 4(NSP4) of A group rotavirus, and evaluate its immune response effects. Methods: NSP4 gene from wildtype rotavirus was cloned into a shuttle plasmid (pshuttle-CMV). The pshuttle-NSP4 is transformed into E.coli BJ5183 to make a homologous recombination with adenovirus skeleton genome(pAdeasy). And the recombinant plasmid pAd-NSP4 is transfected into Ad-293 cell to produce mature adenovirus particles. ICR mice are vaccinated with this recombinant adenovirus by intramuscular and intranasal administration. Results: The recombinant adenovirus titer rise to 108.25CCID50/ml after 3 time passaged. The transcription and expression of NSP4 can be determined by RT-PCR and immunofluorescene assay in vitro. In intramuscular and intranasal administration group, ELISA determines specific serum antibody mean titer at 1:320 and 1:1436.8 level; neutralizing antibody titer at 1:45.3 and 1:71.8. Conclusion: The recombinant adenovirus containing rotavirus NSP4 gene can induce effective immune response against rotavirus. Intranasal administration produce a better protective efficacy than intramuscular in mice. It may be a good candidate to develop a novel engineering vaccine in the future.

  • JIANG Ting-ting, WEN Xiao-xia, CHEN Yao
    China Biotechnology. 2014, 34(2): 7-13. https://doi.org/10.13523/j.cb.20140202
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    Objective:To explore the c2orf68 gene expression of human colorectal adenocarcinoma SW480,SW620 and LS174T cell lines. Further more, to observe the change of their biological characteristics in three cell lines by applying RNA interference technique to silence c2orf68 and to clarify its in the pathogenesis of colorectal cancer. Methods:Using siRNA online design software designed and synthesised of siRNA interference fragments, and transported them to the three cell lines. The mRNA expression of the c2orf68 were detected by RT-PCR, the cell proliferation was checked by MTT, and the cell apoptosis was measured by flow-cytometry. Results: The mRNA expression of the c2orf68 was inhibited by the two pairs siRNA in SW480,SW620 and LS174T cell lines. It showed that the inhibition rates were as follows: 50.05%,50.05%; 49.69%,49.69%; 50.15%,45.79%. Then, siRNA1 of high interference efficiency was selected. The cell proliferation inhibitory rate was 21.2% in LS174T cell line(P<0.05).The cell apoptosis rate was 18.13% in LS174T cell line(P<0.05).Conclusions: The successfully obtained siRNA fragement which specifically degraded its c2orf68 mRNA, inhibited the growth of the test cells, promoted cell apoptosis. It indicated that c2orf68 might be associated with the proliferation on colorectal cancer cells, its pathogenesis might be through gene expression, further regulated the change of the corresponding biological characteristics, and caused the occurrence of colorectal cancer.
  • WANG Xin, CHEN Ling, SUN Fei, LU Hang
    China Biotechnology. 2014, 34(2): 14-20. https://doi.org/10.13523/j.cb.20140203
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    Object: To investigate the change of CXCR7 protein expression after CXCR7-shRNA transfered into human colon cancer cell SW620 which is lentivirus-mediated. Methods: 1. To design and synthesis three shRNA sequence and one negative control sequence of CXCR7. To synthesis and construct recombinant lentiviral vector by pSilencerTM 4.1 system and CXCR7. To transfer the vector into HEK293T cell for packaging viral and to detect titer. 2. To transfer the three different recombinant lentiviral vector and one negative control vector into human colon cancer cell SW620.To detect expression and silence efficiency of CXCR7 mRNA by RT-PCR. The group expressing the best silence efficiency of CXCR7-shRNA is selected as expression vector for next experiment. 3. To detect the change of SW620 cell proliferation after CXCR7-shRNA transfection by MTT. 4. To detect the change of SW620 cell invasion and migration after CXCR7-shRNA transfection by cell scratching experiment. 5. To detect the SW620 protein expression after CXCR7-shRNA transfection by Western blot. Results: 1. Packaging the three different recombinant lentiviral vector and one negative control vector is successful by sequencing and titer is 3.16×108 TU/ml, 4.27×108 TU/ml, 3.93×108 TU/ml, 2.95×108 TU/ml respectively. 2. Expression of CXCR7 mRNA in three positive group is lower than negative control group after transfection(P<0.05).The inhibition rate of CXCR7-shRNA-1 to CXCR7 is higher than the another group. 3. The tumor cell proliferation is reduced after CXCR7-shRNA-1 transfection into SW620 cell and there was significant difference comparing to control group(P<0.05). 4. The migration index of control group and positive group are (49.92±6.41)%,(29.13±5.38)% respectively 24 hours after cell scratching experiment and it has statistical significance (P<0.05).The migration index of control group and positive group are (96.52±7.44)%,(72.03±8.29)% respectively 48h hours after cell scratching experiment and it has statistical significance (P<0.05). 5. Expression of CXCR7 is reduced after transfection into SW620 cell comparing to empty virus vector group and control group and it has statistical significance (P<0.05). Conclusion: Expression of CXCR7 mRNA and CXCR7 protein is down-regulated effectively after CXCR7-shRNA recombinant lentiviral vector transfection into SW620 cell and proliferation and migration of tumor cell is inhibited effectively. It is a good foundation on next study of colon cancer RNAi therapy with lentiviral which target CXCR7/CXCL12 biological axis. And it is a new direction for colon cancer gene therapy.
  • WANG Ai-e, WANG Ying, LI Zhao-xia, SONG Yun-xi, WANG Dong-xia, GAN Le-wen, MA Jian-xin, CHANG Yan, ZHANG Sui-yang, JIANG Xiao-xia
    China Biotechnology. 2014, 34(2): 21-25. https://doi.org/10.13523/j.cb.20140204
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    The nearly identified retrogene NANOGP8 is from a stem cell transcription factor NANOG gene, which expressed in multiple cancers, but generally not in normal tissues and its function is related to cancer development and progression. To investigate the relationship between NANOGP8 expression level and methylation sites at the gene promoters.Bisulphate Sequencing in lung cancer cell line A549 as well as the normal fibroblast cells were performed. Genomic DNA was extracted from these cells and treated with bisulphate, then PCR was performed in the NANOG promoter, encompassing a total of 10 CpGs within nucleotides -1449 to -1295 and -1168 to -952 relative to the transcription start site (TSS) reported by Park. Two regions including 9 CpGs in the potential NANOGP8 promoter, which located within nucleotides -1529 to -1401 and -690 to -587 relative to the TSS of NANOGP8 predicted by Methprimer program were also examined. PCR products were then ligated to pGEM-T vector. The recombinant plasmid was transformed into E.coli DH5α and eight clones for each region were sequenced and blasted. There are no significant changes of the percentage of clones with methylation in NANOG promoter in A549 cell line compared to in the fibroblast cells (65% vs. 67.5%, P=0.62). However, the percentage at the two regions of NANOGP8 shows a significant increase from A549 cell line to the fibroblast cells (12.5% vs.59.7%, P<0.001). NANOGP8 transcriptional level was detected by RT-PCR in both cell lines and found NANOGP8 is highly expressed in A549 cell line but not in the fibroblast cells. The methylation status of 5'-flanking regions of human NANOGP8 is associated with the NANOGP8 expression in lung cell line and may relate to lung cancer development and progression.
  • LIU Tao, HAN Hua-feng, MA Bu-yun, YANG Yuan-qin, ZHUO Ling-yan, ZHOU Li, WANG Yi-gang
    China Biotechnology. 2014, 34(2): 26-33. https://doi.org/10.13523/j.cb.20140205
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    Doxorubicin hydrochloride, an antitumor antibiotic, exhibits prominent killing effects in numerous malignant tumours by suppressing the synthesis of genetic material of carcinoma cells. Nevertheless, the therapeutic effect with single drug is limited and the side-effect is very strong when the dose was added. The oncolytic adenovirus armed with cancer suppressor gene plays an important role in cancer therapy. However, there is little report for the treatment of liver cancers with the combination of oncolytic adenovirus ZD55 armed with Trail and doxorubicin hydrochloride. MTT assay and crystal violet assay were used to determine the growth inhibition effects of various treatments in hepatoma carcinoma cell Bel-7404; and Hoechst 33342 staining and flow cytometry assay were used to evaluate the cell apoptosis; with Western blotting assay to detect the trail and apoptosis-related protein expression; with immunofluorescence method and flow cytometry assay to detect the expression of apoptosis-related receptor. The results indicate that the combination therapy of oncolytic adenovirus ZD55 armed with Trail and doxorubicin hydrochloride could more significantly inhibited tumor cell proliferation and induce cell apoptosis compared with single drug. The cooperation mechanism of the two drugs refer to the expression level of the Trail receptor DR4 and DR5 was explored. The above primarily explored the mechanism of apoptotic inducement by the synergy treatments with DOX and ZD55-Trail, which provide the basis for further combinational treatment of hepatocellular carcinoma.
  • LIU Ben, ZHANG Cai-shun, GAO Xu-bin, LI Hua-nan, KONG Xu
    China Biotechnology. 2014, 34(2): 34-38. https://doi.org/10.13523/j.cb.20140206
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    Objective:To observe the effects of polycaprolactone/chitosan(PCL/CS)nerve conduit combined with bone marrow mesenchymal stem cells(BMSCs)for repairing sciatic nerve defect in rats.Methods:Twenty four SD rats were made a model of 5mm right sciatic nerve defect in length and were randomly divided into four groups,group A:PCL/CS nerve conduit combined with BMSCs transplantation;group B:PCL nerve conduit combined with BMSCs transplantation;group C:CS nerve conduit combined with BMSCs transplantation;group D:autograft nerve.Sciatic function index(SFI)was evaluated every 2 weeks after surgery and tests of electrophysiology,the weight ratio of the gastrocnemius muscles,histological observation and immunohistochemistry were performed at 12 weeks postimplantation.Results:The recovery rate of motor function of group A was higher in comparison to group B and C but lower than that of group D as revealed by an SFI score.Compared the test results of electrophysiology and the weight ratio of the gastrocnemius muscles in group A with that in group C and D,there were not statistically significant(P>0.05),but that in group A better than that in group B (P<0.05).Histological observation:the regenerative nerve of group A lined up intensively.S-100 protein immunohistochemistry showed there were much more regenerating Schwann cells in group A.Conclusion:PCL/CS nerve conduit combined with BMSCs can promote peripheral nerve injury repair and its result is the same as CS nerve conduit and autograft nerve but better than PCL nerve conduit.
  • ZHANG Feng-yu, HU Dan, GONG Xiu-fang, ZHENG Feng, PAN Xiu-zhen, WANG Chang-jun
    China Biotechnology. 2014, 34(2): 39-44. https://doi.org/10.13523/j.cb.20140207
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    Objective:To clone and prokaryotically express the β-galactosidase of Streptococcus suis serotype 2 and to determine the enzymatic properties of the recombinant protein. Methods: bgaC gene was amplified by PCR using the primers which are on the basis of 05ZYH33 genome sequences and cloned into the expression vector. Thereafter, the gene was cloned into prokaryotic expression plasmid pET28a, and the recombinant plasmid pET28a-bgaC was transformed into E.coli BL21. After the induced expression by IPTG, the isolated BgaC protein was analyzed with SDS-PAGE and purified by chromatography. Thus obtaining the completely purified BgaC protein and its enzymatic activity was measured afterward. Results: bgaC gene could express highly in E.coli. The molecular weight of the recombinant expressed β-galactosidase BgaC was about 69kDa, the enzymatic activity analysis indicated the optimum temperature, action time, pH and the substrate concentration were 42℃,30min, 5.5 and 10mmol/L, respectively. Enzymatic activity of BgaC was about 1615U/ml, specific activity was 1076U/mg. Conclusions: The experimental results showed that the bgaC gene can be highly expressed in prokaryotic system, and the recombinant protein has the best enzymatic activity in optimizal temperature, reactive time and pH.
  • YANG Fan, HUANG Hu, LI Yi-chen, DENG Heng-lu, WU Mao-bo, ZHONG Ling, HOU Yong-min
    China Biotechnology. 2014, 34(2): 45-51. https://doi.org/10.13523/j.cb.20140208
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    Follicle-stimulating hormone (FSH) has been utilized to treat male and female infertility. However, frequent injection of FSH to patients is required due to its short serum half-life. Developing a long-acting recombinant FSH is clinically desirable. A DNA construct containing FSH-CTP-vFc was made by fusing the coding sequence of carboxyl-terminal peptide (CTP) of the β-subunit of human chorionic gonadotropin and a variant of human Immunoglobulin G2(IgG2) Fc fragment (vFc) into FSH gene. The DNA construct was transfected into Chinese Hamster Ovary (CHO) cells, and cell clones with highly and stably expressed FSH-CTP-vFc fusion protein were selected. The cultured medium of cell was collected for protein purification by protein A based chromatography. Biochemical and physical characterization were performed for the fusion proteins purified from the samples of different culture time. ELISA assay and animal study shows that the purified FSH-CTP-vFc protein has significant activity in vitro and in vivo. Pharmacokinetic research demonstrates that the serum half-life of the fusion protein is almost ten fold of the recombinant FSH's. Obviously, this novel long-acting FSH-CTP-vFc protein could greatly reduce the injection frequency and improve the patient compliance.
  • HE Xiao-juan, XUE Zheng-lian, ZHAO Zhi-jun, SUN Jun-song, SHI Ji-ping
    China Biotechnology. 2014, 34(2): 52-58. https://doi.org/10.13523/j.cb.20140209
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    Thermophilic alkaline catalase is an important textile enzyme. According to the codon bias of Escherichia coli, the gene encoding manganese catalase of Thermus thermophilus HB27 were optimized. The modified gene was inserted into the expression vector pET28a(+) and transformed into Escherichia coli BL21 (DE3). After cultured with 14 mmol/L Mn2+ and induced with 0.2 mmol/L IPTG for 2 hours at 42℃, the activity of catalase reached 25 U/ml in supernatant of cell disruption. The enzyme was purified by Ni affinity chromatography and its enzyme characterization was analyzed. The optimal temperature and pH of the catalase was 70℃ and pH10.0, respectively. when the enzyme was incubated at 80℃ for 2 hours, the catalase activity was not lost. After incubated at pH9.0~11.0 for 2 hours, its activity retained 90%. The results showed that the manganese catalase has a good potential for industrial development.
  • WANG Jia-wen, FENG Jing-xian, LIN Jun-sheng, DIAO Yong
    China Biotechnology. 2014, 34(2): 59-64. https://doi.org/10.13523/j.cb.20140210
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    The artificial aptazyme based riboswitch has emerged as a powerful tool for regulating gene expression in recent years. The most common aptazyme consists of a hammerhead ribozyme and an aptamer, it is simply a piece of structured RNA and easy to design. As a cis-acting element, aptazyme riboswitch can recognize specific targets and exert effective influence on translation without the help of protein co-factor through irreversible self-cleavage in vivo, which makes it a versatile platform functions in various cells. The most popular approach to generate an aptazme based riboswitch is to rationally cojoin a ribozyme to an aptamer and screen with a high throughout method after integrated into mRNA. With considerable magnitude of on-off control and rapid induction as well as concise regulation, this riboswitch will have important application in in vivo sensing, gene therapy and biological processor.
  • JIA Dong, ZHANG Bin, MA Rui-yan, TANG Gui-gang, ZHAO Jie, WANG Wen-hua, ZHOU Lin
    China Biotechnology. 2014, 34(2): 65-70. https://doi.org/10.13523/j.cb.20140211
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    Objective:To establish a protocol to determine the structure of RNA 5'end cap by using co-immunoprecipitation(Co-IP) in conjunction with microarray technology. Methods: Total RNAs isolated from Caenorhabditis elegans were precipitated with the antibody against M3G cap structure. For Microarray analysis, the probes were designed for 127 non-coding RNAs (ncRNAs) of C.elegans. The cap structure was determined and RNA transcription was also analyzed. Results: 37 ncRNAs was isolated and identified as containing m3G cap structure. This number is similar with other species, for which m3G cap RNAs have been found. Conclusions: It is feasible and effective to determine the structure of ncRNA 5' end cap by using Co-IP followed by Microarray analysis. This method is of great specificity and high sensitivity, which maybe applied to the large-scale RNA cap structure identification, the discovery of novel RNA and the identification of RNA functions.
  • WANG Jian-feng, ZHANG Si-liang, WANG Yong
    China Biotechnology. 2014, 34(2): 71-77. https://doi.org/10.13523/j.cb.20140212
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    Resveratrol is an important plant stilbene with considerable pharmaceutical values. To achieve the de novo biosynthesis of resveratrol in E. coli, a heterologous resveratrol biosynthetic pathway consisting of tyrosine ammonia lyase (TAL), coumaroyl-CoA synthase (4CL) and stilbene synthase (STS) was constructed. The engineered strain only produced 2.67 mg/L resveratrol after 3 days cultivation. To improve the efficiency of heterologous pathway, the 4CL and STS modules were further engineered using strategies of fusion expression, high-copy expression and promoter engineering. Eventually, the yield of resveratrol reached 25.76 mg/L with a 9.6-fold improvement compared with the initial strain. The useful information for the construction of more efficient recombinant resveratrol producer was provided, and it laid a foundation for the large-scale production of resveratrol through microbial fermentation.

  • PENG Wu-li, LUO Zhan-rong, JI Xin-cheng, YUN Li-juan, SHI Qian, YU Xue-hui
    China Biotechnology. 2014, 34(2): 78-83. https://doi.org/10.13523/j.cb.20140213
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    To establish a duplex PCR assay for simultaneously detecting Brucella and Coxiella burnetii, two genus-specific genes sequences according to the Bp26 of Brucella spp. and IS1111a of Coxiella burnetii were obtained in GenBank and two specific primers pairs were designed respectively. After optimizing the PCR reactions and amplification conditions, the duplex assay was finally established. This assay had better specificity, repeatability and higher sensitivity. Using this assay to detect 172 samples including bloods,serums, fetuses and milk of abortion cattle in clinic,53 brucellosis positive samples and 10 Q fever positive samples were detected out, the positive rates were separately 30.8% and 5.8%, 2 co-infection positive samples were detected out also and the positive rate was 1.2%. The above preliminary clinical results indicated this assay can be used for safely, simultaneously, rapidly and sensibly detecting Brucella and Coxiella burnetii.
  • GAO Xue-li, WU Jian-ping, XU Gang, YANG Li-rong
    China Biotechnology. 2014, 34(2): 84-92. https://doi.org/10.13523/j.cb.20140214
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    A strain,having strong antagonistic activity toward phytopathogens, was identified as Trichoderma ghanense by the methods of molecular biology. This strain of Trichoderma ghanense as testing strain,optimization of the solid state fermentation medium was performed to improve the spore yield. Through the single factor experiment, Plackett-Burman experiment, the steepest ascent experiment and the response surface analysis, sugar,corn steep liquor and MgSO4were identified as the most important factors to influence the spore yield. The optimal concentration of the three factors is 0.56%, 0.56% and 2.59% respectively. The optimal initial water content of the medium was identified as 35% and the optimal initial pHwas identified as 9. The highest spore yield have been achieved as 1.16×109 CFU/g initial dry substrate (IDS) on the optimized solid state medium, which is 17 times higher than the initial medium.
  • LIU Qiang, XU Qing, LI Shuang
    China Biotechnology. 2014, 34(2): 93-97. https://doi.org/10.13523/j.cb.20140215
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    The production of fumaric acid was optimized using immobilized Rhizopus oryzae with biofilm reactor and neutralized with Na2CO3 in 5L stirred tank reactor. Visualization method (IVOS) was used to optimize the process for fumaric acid production. Under the optimized condition (80g/L total glucose),the best results were fumaric acid titer of 21.10g/L, the volumetric productivity of 0.25 g/L·h and the yield of 28%, respectively; in the continuous batch fermentation condition(40g/L total glucose), the best results were fumaric acid titer of 10.8 g/L,yield and volumetric productivity of fumarate were 27% and 0.36 g/L·h,respectively. Owing to the limitation of specific surface area of biofilm and its blocking mass transfer, biofilm reactor could not give an effective fumaric acid production. Future prospects for improvement of fumaric acid production include developing new methods for immobilized cell and bioreactor.
  • YANG Fa-yu, GE Xiang-lian, GU Feng
    China Biotechnology. 2014, 34(2): 98-103. https://doi.org/10.13523/j.cb.20140216
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    Manipulating genomes by traditional targeted genome editing technique (gene targeting) is inefficient, making it impractical or difficult to use the technique as a gene-therapy approach to cure diseases and decipher gene functions. To overcome this problem, next-generation targeted gene-editing techniques were developed to achieve higher efficiency for gene correction, specific locus integration or knock-in and high throughput gene knock-out. The progress of new techniques for targeted genome-editing tools were reviewed, including zinc finger nucleases (ZFN), transcription activator-like effector nucleases (TALENs), and a clustered regularly interspaced short palindromic repeats (CRISPR)/Cas system. A brief summary of the history, recent structure, progress, and future prospects was presented. After comparing these tools, it was found that CRISPR systems offer an advantage over ZFN and TALEN.
  • MAN Chao-lai, YANG Mei-ling
    China Biotechnology. 2014, 34(2): 104-108. https://doi.org/10.13523/j.cb.20140217
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    Circulating microRNAs (miRNAs) are a family of important small non-coding RNA molecules, which participate in communication between different cells. Because circulating miRNA can be used as biomarkers of many diseases, it has attracted more attention recently. The sources and existence forms of circulating miRNAs were briefly summarized, sample preparation and detection methods of circulating miRNAs were analyzed. Additionally, the applications of circulating miRNAs were also discussed. It can provide references for further study and use of miRNAs in theory and practice fields.

  • GAO Jiao-qi, HAN Xi-tong, KONG Liang, YUAN Wen-jie, WANG Na, BAI Feng-wu
    China Biotechnology. 2014, 34(2): 109-117. https://doi.org/10.13523/j.cb.20140218
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    Kluyveromyces marxianus is a kind of "non-conventional" yeasts that have been studied widely. For its advantages of high temperature resistance, rapid growth and the capacity to utilize various substrates, there are increasing applications in the industrial biotechnology. K. marxianus is able to produce kinds of hydrolase, such as inulinase and β-galactosidase etc. And ethanol can also be achieved by K. marxianus from inulin, wheey, molasses, xylose and so on. Some advances have also been made in the molecular biology research of K. marxianus. Conseqeuntly, some significant research progresses in applications of enzyme secretion, ethanol fermentation, heterologous proteins production by K. marxianus in recent years were reviewed to facilitate further applications of K. marxianus in the industrial biotechnology.
  • LI Yun-cheng, TANG Yue-qin, KIDA Kenji
    China Biotechnology. 2014, 34(2): 118-128. https://doi.org/10.13523/j.cb.20140219
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    Bioethanol is considered as the most important alternative of fossil fuel. Saccharomyces cerevisiae is the most effective ethanol-producing microorganism widely used in the current bioethanol industry. It is very important and urgent to construct strains with excellent inhibitor tolerance and pentose fermenting ability for the production of bioethanol from lignocellulosic biomass. Since the OMICS technologies, including genomics, proteomics, transcriptomics, metabolomics and fluxomics, can reveal the laws of life activities of strains in different level from genotype to phenotype, it has been broadly applied in construction of engineered strains, especially in the identification of target genes, the optimization of metabolic pathway and the reveal of metabolic mechanism. The application of OMICS makes strain construction works more targeted and clarity, and the breeding cycle is greatly shortened.The application and recent progress of OMICS in construction of Saccharomyces cerevisia strains for bioethanol production are discussed.