利用海洋硅藻生产生物活性物质研究进展*

张虎,刘镇洲,陈家敏,高保燕,张成武

中国生物工程杂志 ›› 2021, Vol. 41 ›› Issue (4) : 81-90.

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中国生物工程杂志 ›› 2021, Vol. 41 ›› Issue (4) : 81-90. DOI: 10.13523/j.cb.2012057
综述

利用海洋硅藻生产生物活性物质研究进展*

作者信息 +

Research Progress on the Production of Bioactive Compounds from Marine Diatoms

Author information +
文章历史 +

摘要

生物活性物质在食品、饵料、化妆品、保健品和医药等行业具有广阔的应用前景,其研究早已受到广泛关注。鉴于海洋硅藻具有生长速度快、生物活性物质含量高、易于规模培养、便于提取等诸多优势,为理想的生物活性物质生产者。尽管国内外已进行了大量利用海洋硅藻生产生物活性物质的研究,但是受限于培养工艺老旧、生产成本过高等缺陷,商业化利用海洋硅藻开发生物活性物质依然停滞不前。阐述海洋硅藻五种常见生物活性物质的应用价值,进一步探讨海洋硅藻高产生物活性物质的策略,就如何低成本、高效开发利用硅藻源生物活性物质提出建议,为海洋硅藻商业化开发利用提供参考。

Abstract

Bioactive compounds have a broad range of applications in food, feed, cosmetic, nutraceutical, and pharmaceutical industries. Thus, the studies of bioactive compounds have been gaining great attention from science and the public in recent decades. Given the advantages of fast growth, high content of bioactive compounds, easy to be cultured and scaled up, and effective biorefinery, marine diatoms were considered to be the most promising producers of natural bioactive compounds. Although a large number of studies have been carried out to enhance the production of bioactive compounds from marine diatoms, a commercial production scale has seldom been realized due to several intrinsic shortcomings such as old culture technology and high production cost. This review aims to provide an overview of bioactive compounds from marine diatoms and their high production strategies. The path forward for further commercial production of the bioactive compounds from marine diatoms with respect to 3 different opportunities is also discussed, which will in turn accelerate the development of microalgae industry and provide support for human health and high-quality life.

关键词

海洋硅藻 / 生物活性物质 / 筛选 / 环境因子 / 培养模式

Key words

Marine diatoms / Bioactive compounds / Screening / Environmental factors / Culture mode

引用本文

导出引用
张虎, 刘镇洲, 陈家敏, . 利用海洋硅藻生产生物活性物质研究进展*[J]. 中国生物工程杂志, 2021, 41(4): 81-90 https://doi.org/10.13523/j.cb.2012057
Hu ZHANG, Zhen-zhou LIU, Jia-min CHEN, et al. Research Progress on the Production of Bioactive Compounds from Marine Diatoms[J]. China Biotechnology, 2021, 41(4): 81-90 https://doi.org/10.13523/j.cb.2012057
中图分类号: Q819   

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Under nutrient deplete conditions, diatoms accumulate between 15% to 25% of their dry weight as lipids, primarily as triacylglycerols (TAGs). As in most eukaryotes, these organisms produce TAGs via the acyl-CoA dependent Kennedy pathway. The last step in this pathway is catalyzed by diacylglycerol acyltransferase (DGAT) that acylates diacylglycerol (DAG) to produce TAG. To test our hypothesis that DGAT plays a major role in controlling the flux of carbon towards lipids, we overexpressed a specific type II DGAT gene, DGAT2D, in the model diatom Phaeodactylum tricornutum. The transformants had 50- to 100-fold higher DGAT2D mRNA levels and the abundance of the enzyme increased 30- to 50-fold. More important, these cells had a 2-fold higher total lipid content and incorporated carbon into lipids more efficiently than the wild type (WT) while growing only 15% slower at light saturation. Based on a flux analysis using (13) C as a tracer, we found that the increase in lipids was achieved via increased fluxes through pyruvate and acetyl-CoA. Our results reveal overexpression of DAGT2D increases the flux of photosynthetically fixed carbon towards lipids, and leads to a higher lipid content than exponentially grown WT cells.
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Biologically derived fuels are viable alternatives to traditional fossil fuels, and microalgae are a particularly promising source, but improvements are required throughout the production process to increase productivity and reduce cost. Metabolic engineering to increase yields of biofuel-relevant lipids in these organisms without compromising growth is an important aspect of advancing economic feasibility. We report that the targeted knockdown of a multifunctional lipase/phospholipase/acyltransferase increased lipid yields without affecting growth in the diatom Thalassiosira pseudonana. Antisense-expressing knockdown strains 1A6 and 1B1 exhibited wild-type-like growth and increased lipid content under both continuous light and alternating light/dark conditions. Strains 1A6 and 1B1, respectively, contained 2.4- and 3.3-fold higher lipid content than wild-type during exponential growth, and 4.1- and 3.2-fold higher lipid content than wild-type after 40 h of silicon starvation. Analyses of fatty acids, lipid classes, and membrane stability in the transgenic strains suggest a role for this enzyme in membrane lipid turnover and lipid homeostasis. These results demonstrate that targeted metabolic manipulations can be used to increase lipid accumulation in eukaryotic microalgae without compromising growth.
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Hamilton M L, Haslam R P, Napier J A, et al. Metabolic engineering of Phaeodactylum tricornutum for the enhanced accumulation of omega-3 long chain polyunsaturated fatty acids. Metabolic Engineering, 2014,22:3-9.
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Most microalgae are obligate photoautotrophs and their growth is strictly dependent on the generation of photosynthetically derived energy. We show that the microalga Phaeodactylum tricornutum can be genetically engineered to thrive on exogenous glucose in the absence of light through the introduction of a gene encoding a glucose transporter (glut1 or hup1). This demonstrates that a fundamental change in the metabolism of an organism can be accomplished through the introduction of a single gene. This also represents progress toward the use of fermentation technology for large-scale commercial exploitation of algae by reducing limitations associated with light-dependent growth.
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Daboussi F, Leduc S, Maréchal A, et al. Genome engineering empowers the diatom Phaeodactylum tricornutum for biotechnology. Nature Communications, 2014,5(1):3831.
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Jungandreas A, Schellenberger Costa B, Jakob T, et al. The acclimation of Phaeodactylum tricornutum to blue and red light does not influence the photosynthetic light reaction but strongly disturbs the carbon allocation pattern. PLoS One, 2014,9(8):e99727.
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Background: Microalgae accumulate lipids when exposed to stressful conditions such as nutrient limitation that can be used to generate biofuels. Nitrogen limitation or deprivation is a strategy widely employed to elicit this response. However, this strategy is associated with a reduction in the microalgal growth, leading to overall poor lipid productivities. Here, we investigated the combined effect of a reduced source of nitrogen (ammonium) and super-saturating light intensities on the growth and induction of lipid accumulation in two model but diverse microalgal species, Phaeodactylum tricornutum and Nannochloropsis oceanica. We hypothesized that the lower energy cost of assimilating ammonium would allow the organisms to use more reductant power for lipid biosynthesis without compromising growth and that this would be further stimulated by the effect of high light (1000 micromol m(-2) s(-1)) stress. We studied the changes in growth and physiology of both species when grown in culture media that either contained nitrate or ammonium as the nitrogen source, and an additional medium that contained ammonium with tungsten in place of molybdenum and compared this with growth in media without nitrogen. We focused our investigation on the early stages of exposure to the treatments to correspond to events relevant to induction of lipid accumulation in these two species. Results: At super-saturating light intensities, lipid productivity in P. tricornutum increased twofold when grown in ammonium compared to nitrogen free medium that increased further when tungsten was present in the medium in place of molybdenum. Conversely, N. oceanica growth and physiology was not compromised by the high light intensities used, and the use of ammonium had a negative effect on the lipid productivity, which was even more marked when tungsten was present. Conclusions: Whilst the use of ammonium and super-saturating light intensities in P. tricornutum was revealed to be a good strategy for increasing lipid biosynthesis, no changes in the lipid productivity of N. oceanica were observed, under these conditions. Both results provide relevant direction for the better design of processes to produce biofuels in microalgae by manipulating growth conditions without the need to subject them to genetic engineering manipulation.
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张虎, 张桂艳, 温小斌, 等. pH对小球藻Chlorella sp.XQ-200419光合作用、生长和产油的影响. 水生生物学报, 2014,38(6):1084-1091.
Zhang H, Zhang G Y, Wen X B, et al. Effects of pH on the photosynthesis, growth and lipid production of Chlorella sp.XQ-200419. Acta Hydrobiologica Sinica, 2014,38(6):1084-1091.
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Frada M J, Burrows E H, Wyman K D, et al. Quantum requirements for growth and fatty acid biosynthesis in the marine diatom Phaeodactylum tricornutum (Bacillariophyceae) in nitrogen replete and limited conditions. Journal of Phycology, 2013,49(2):381-388.
We determined the quantum requirements for growth (1/varphimu ) and fatty acid (FA) biosynthesis (1/varphiFA ) in the marine diatom, Phaeodactylum tricornutum, grown in nutrient replete conditions with nitrate or ammonium as nitrogen sources, and under nitrogen limitation, achieved by transferring cells into nitrogen free medium or by inhibiting nitrate assimilation with tungstate. A treatment in which tungstate was supplemented to cells grown with ammonium was also included. In nutrient replete conditions, cells grew exponentially and possessed virtually identical 1/varphimu of 40-44 mol photons . mol C(-1) . In parallel, 1/varphiFA varied between 380 and 409 mol photons . mol C(-1) in the presence of nitrate, but declined to 348 mol photons . mol C(-1) with ammonium and to 250 mol photons . mol C(-1) with ammonium plus tungstate, indicating an increase in the efficiency of FA biosynthesis relative to cells grown on nitrate of 8% and 35%, respectively. While the molecular mechanism for this effect remains poorly understood, the results unambiguously reveal that cells grown on ammonium are able to direct more reductant to lipids. This analysis suggests that when cells are grown with a reduced nitrogen source, fatty acid biosynthesis can effectively become a sink for excess absorbed light, compensating for the absence of energetically demanding nitrate assimilation reactions. Our data further suggest that optimal lipid production efficiency is achieved when cells are in exponential growth, when nitrate assimilation is inhibited, and ammonium is the sole nitrogen source.
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Marine microalgae exhibit a diversified phosphorus physiology and have also been recently found to show high inter-taxa variability in their phosphate induced-polar lipids' remodelling. Identification of phosphorus physiology aspects that are more related to lipid remodelling can contribute to better understanding of such intricate phytoplankton lipid metabolism. Therefore, some aspects of phosphorus physiology related to its uptake, storage and use were evaluated in a taxonomically diversified group of nine marine microalgae that was arranged into three subgroups, each of them including species showing similar polar lipid responses to phosphate. Luxury phosphate uptake (PU) was the physiological aspect best associated to microalgal polar lipid metabolism as it was maximal in species (Picochlorum atomus, Tetraselmis suecica and Nannochloropsis gaditana) that were able to counterbalance between phospholipids (PL) and betaine lipids (BL). Cryptophytes (Rhodomonas baltica, Chroomonas placoidea), characterized by their constitutive BL and flexible PL contents in response to phosphate, had almost no luxury PU and showed higher phosphorus cell quota (QP) under phosphate deprivation. Haptophyes (Isochrysis galbana, Diacronema vlkianum), with constitutive BL contents and permanently minimal PL contents, showed the lowest QP when deprived of phosphate while their luxury PU was below that for green microalgae. Induction of alkaline phosphatase activity following phosphate depletion was maximal in diatoms (Phaeodactylum tricornutum, Chaetoceros gracilis) and I. galbana but it was unrelated to lipid remodelling. Despite strong influence of taxonomy, polar lipid remodelling accounted for 38.8% of total variation when microalgae were ordinated using their physiological responses to phosphorus as descriptive variables.
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Brembu T, Mühlroth A, Alipanah L, et al. The effects of phosphorus limitation on carbon metabolism in diatoms. Philosophical Transactions of the Royal Society B: Biological Sciences, 2017,372(1728):20160406.
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Yang Z K, Zheng J W, Niu Y F, et al. Systems-level analysis of the metabolic responses of the diatom Phaeodactylum tricornutum to phosphorus stress. Environmental Microbiology, 2014,16(6):1793-1807.
Phosphorus is an important macronutrient. To understand the molecular and cellular responses to phosphorus stress better, transcriptome profiling in combination with biochemical investigations was conducted in the model diatom Phaeodactylum tricornutum. Out of 10 402 predicted genes, 2491 and 405 genes were significantly upregulated or downregulated respectively. Unsurprisingly, genes associated with phosphate uptake were upregulated, such as the phosphate transporters and alkaline phosphatases. Genes encoding stress-shock proteins were accordingly upregulated, including genes associated with stress-responsive proteins, signal transduction and secondary metabolism. Additionally, genes related to protein translation, carbon fixation, glycolysis and the citric acid cycle were also upregulated. Genes associated with gene transcription were downregulated, thereby resulting in the upregulation of translation to compensate for the limited supply of messenger RNA. The downregulation of genes related to beta-oxidation could contribute to the accumulation of fatty acids. Accordingly, triacylglycerols, which are important for energy storage, were determined to increase by 1.65-fold. Intracellular membranes, other than chloroplast membranes, tended to be dispersed; this finding was in accordance with the increased transcription of a total of 11 genes encoding putative phospholipases. Taken together, this work revealed the coordination of multiple metabolic pathways and certain key genes in the adaptation of P. tricornutum to phosphorus stress.
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Jungandreas A, Wagner H, Wilhelm C. Simultaneous measurement of the silicon content and physiological parameters by FTIR spectroscopy in diatoms with siliceous cell walls. Plant and Cell Physiology, 2012,53(12):2153-2162.
Diatoms are the most successful biomass producers worldwide. Therefore, physiological and chemical methods to measure the cell response to a variety of abiotic factors are the focus of recent research. We used the two model diatoms Cyclotella meneghiniana and Skeletonema costatum for the development of Fourier transform infrared (FTIR) spectroscopy-based methods to measure simultaneously the elemental composition of the cells and their cell-specific physiological properties. The cells were grown in chemostat cultures to study the response of Si limitation. The model organisms showed different reactions in terms of their cell properties. Si limitation was accompanied by a drop in the growth rate, a reduced content in Si per cell and a decreased Si : C ratio. Furthermore, the C allocation pattern was changed in both diatoms under Si limitation, as shown by FTIR spectroscopy. Moreover, we used FTIR spectra to develop PLS (partial least square) regression methods to predict the Si content and the Si : C ratio for single as well as multiple species. All PLS regression models were validated by standard chemical methods and showed good prediction accuracy, with the coefficient of determination R(2) being >/=0.93. We could show that it is possible to monitor phytoplankton properties such as C allocation, the Si content and the Si : C ratio at the same time via FTIR spectroscopy.
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For 40 million years, diatoms have dominated the reverse weathering of silica on Earth. These photosynthetic protists take up dissolved silicic acid from the water and precipitate opaline silica to form their cell wall. We show that the biosilica of diatoms is an effective pH buffer, enabling the enzymatic conversion of bicarbonate to CO2, an important step in inorganic carbon acquisition by these organisms. Because diatoms are responsible for one-quarter of global primary production and for a large fraction of the carbon exported to the deep sea, the global cycles of Si and C may be linked mechanistically.
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Phaeodactylum tricornutum Bohlin is an ideal model diatom; its complete genome is known, and it is an important economic microalgae. Although silicon is not required in laboratory and factory culture of this species, previous studies have shown that silicon starvation can lead to differential expression of miRNAs. The role that silicon plays in P. tricornutum growth in nature is poorly understood. In this study, we compared the growth rate of silicon starved P. tricornutum with that of normal cultured cells under different culture conditions. Pigment analysis, photosynthesis measurement, lipid analysis, and proteomic analysis showed that silicon plays an important role in P. tricornutum growth and that its presence allows the organism to grow well under green light and low temperature.
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致谢

感谢广州市对外科技合作计划(201907010005)对本研究的资助。

基金

*国家自然科学基金(32002412)
中央高校基本科研业务费专项资金资助项目(21619305)

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