细胞代谢过程中的酶促糖基化及其功能
北京理工大学生物工程系生物转化与合成生物系统研究室 北京 100081
Enzymatic Glycosylation and Its Function in Metabolic Process of Cells
Institute for Biotransformation and Synthetic Biosystem, Department of Biological Engineering, Beijing Institute of Technology, Beijing 100081,China
收稿日期: 2017-09-5 修回日期: 2017-11-21 网络出版日期: 2018-01-15
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Received: 2017-09-5 Revised: 2017-11-21 Online: 2018-01-15
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本文引用格式
刘啸尘, 刘护, 张良, 李春.
LIU Xiao-chen, LIU Hu, ZHANG Liang, LI Chun.
细胞代谢过程中发生的多种生物化学反应不仅能够为生命机体提供生存所需要的物质和能量,而且能够精细调控细胞内各种生物过程以适应复杂多变的外界环境。其中,糖基化反应是生物代谢调控过程中重要的分子修饰反应机制之一,直接或间接参与有机体的多项生命活动[1]。糖基化反应普遍发生在细胞内的各种细胞器中。在原核细胞中,大部分糖基化反应发生在细胞质、质膜和周质空间内;在真核细胞中,糖基化反应常发生在细胞核、细胞质、高尔基体、内质网和细胞膜等部位。
本文主要概述糖基转移酶的分类、结构和催化机制,重点介绍细胞中蛋白质类生物大分子和小分子次生代谢产物的糖基化修饰反应以及对细胞代谢过程的影响,并对当前糖基转移酶及其催化的糖基化反应在人类健康和工业、农业等发展领域的应用前景进行了讨论。
1 糖基转移酶与糖基化修饰
1.1 糖基转移酶
糖基转移酶(glycosyltransferase, GT,EC:2.4.x.y)广泛存在于真核生物、细菌、古生菌和病毒体等所有生命细胞体内,催化糖基化反应形成相应的糖苷键[5]。通过分析各种生物基因组数据发现,生物基因组中约1%的基因编码糖基转移酶[6],说明糖基转移酶及其催化的糖基转移反应在生物体中广泛存在并具有重要意义。迄今为止,CAZy数据库(CAZy, http://afmb.cnrs-mrs.fr/CAZY/)中已记录了超过26 000条来自不同生物的糖基转移酶基因,根据同源性不同,这些糖基转移酶被分为100多个家族。此外,还有超过5 000条未被分类的糖基转移酶。在糖基转移酶家族中有一大类糖基转移酶以尿苷二磷酸糖基(UDP-sugar)为糖基供体,被称为尿苷二磷酸糖基转移酶(UGTs)。其命名方式如图1所示,其中代表家族的阿拉伯数字与物种之间的对应关系如表1所示[7]。根据糖基转移酶的三维拓扑结构的不同,可将糖基转移酶分为GT-A型、GT-B型和GT-C型。根据催化过程中形成的过渡态的不同,糖基转移酶的作用机制包括单分子亲核取代反应机制(SN1-like mechanism)、双分子亲核取代反应机制(SN2-like mechanism)、分子间亲核取代反应机制(SNi-like mechanism)和双取代反应机制(double-displacement mechanism)[8]。细胞内各种糖基转移酶通过上述不同作用机制,对特定物质进行糖基化修饰,细胞内的蛋白质等生物大分子和小分子代谢物的糖基化反应无时无刻不在进行,是维持细胞代谢过程平衡、稳定和保护细胞的重要机制。糖基化修饰作用对细胞代谢过程及其功能的影响见表2。
图1
图1
尿苷二磷酸糖基转移酶超家族的命名方式
Fig.1
Naming of UGT families
UGT1A3 is divided into four parts a: “UGT” on behalf of uridine diphosphate glycosyltransferase; b: “1” represents a UGT family; c: “A” on behalf of the subfamily; d: “3” represents a particular glycosyltransferase in the subfamily
表1 UGT中不同家族所对应的生物物种
Table 1
家族 | 物种 |
---|---|
1~8 | 哺乳动物 |
9~27 | 无脊椎动物 |
31~50 | 昆虫 |
51~70 | 真菌 |
71~100 | 植物 |
101~200 | 细菌 |
201 | 为昆虫类的节肢动物 |
表2 糖基化修饰作用对细胞代谢过程的影响
Table 2
受体分子 | 细胞代谢过程的影响 | 实 例 | 参考文献 |
---|---|---|---|
蛋白质分子 | 维持蛋白质正常功能 | 转运蛋白(hTPPT) N-糖基化异常丧失了其对硫胺素焦磷酸的转运功能 | [9] |
蛋白质分子 | 维持细胞结构稳定 | 细菌细胞膜和细胞外区域的蛋白糖基化水平下降抑制细菌的生长 | [10] |
蛋白质分子 | 调节基因转录与表达 | 蛋白质SCAP发生糖基化修饰后激活脂肪合成基因的表达 | [11] |
蛋白质分子 | 调节细胞周期 | 周期调控蛋白c-Myc糖基化后可以促进细胞周期进程 | [12] |
蛋白质分子 | 参与信号转导 | 细胞内 β-catenin 蛋白糖基化最终导致 Wnt/β-catenin 途径使信号通路关闭 | [13] |
小分子化合物 | 消除小分子化合物细胞毒性 | 对棉子酚进行糖基化修饰的作用会消除棉子酚对昆虫细胞的毒性 | [14] |
小分子化合物 | 参与胁迫应答反应 | 对小分子花青素的糖基化修饰作用会显著增强植物对干旱和盐胁迫的耐受性 | [15] |
小分子化合物 | 调节激素平衡 | 拟南芥中通过糖基转移作用调节脱落酸浓度,维持其在细胞中的内稳态 | [16] |
1.2 蛋白质的糖基化修饰反应
图2
图2
蛋白质翻译后修饰作用
Fig.2
Protein post-translation modifications
1: Protein translation process; 2: Protein O glycosylation process, mainly in the cytoplasm and nucleus; 3: Protein N glycosylation process, mainly in the endoplasmic reticulum; 4: Protein other post-translational modification effect
蛋白质的糖基化修饰主要包括N-糖基化和O-糖基化。N-糖基化是糖基连接在蛋白质天冬酰胺侧链的N原子上的修饰作用,而O-糖基化是糖基连接到蛋白质丝氨酸或苏氨酸羟基的O原子上的修饰作用[19]。N-糖基化是最复杂的糖基化修饰,初始于内质网并最终在高尔基体内形成成熟的糖链结构,而O-糖基化发生在细胞质或细胞核内。蛋白质的糖基化过程不仅需要高效有序控制糖基的质量和数量,而且必须与蛋白质的运输和分选协调作用,以保证糖基或糖链被精确转移到蛋白质的正确位置[20]。正确的糖基化修饰是蛋白质行使正常功能的基础。糖基化修饰能够影响蛋白质的空间结构、催化、运输和定位功能,还能够影响蛋白质在细胞生物过程中的分子识别、细胞通信、信号转导,细胞的发育和分化等其它重要功能[21,22]。
1.3 小分子化合物的糖基化反应
糖基化修饰可以稳定小分子化合物的结构,增加水溶性并且影响小分子在细胞内的空间分布。从化学结构上来看,这些小分子一般含有羟基(-OH)、羧基(-COOH)、氨基(-NH2)和巯基(-SH)等基团,这些基团使得小分子极其活跃,容易攻击细胞中的蛋白质、脂类等,从而影响细胞的生物过程。糖基化反应通过将糖基转移到这些活性基团上实现稳定小分子化学性质的功能。同时,引入的糖基结构还会增强这些分子的水溶性。糖基化修饰的小分子由于结构稳定且溶解性增强而被转移到细胞特定区域内。植物细胞中的液泡含有多种转运蛋白,能够将糖基修饰的小分子转移到液泡内,是储存糖基化修饰分子的最重要场所。细胞会将这些分子先糖基化后再储存到细胞的特殊位置如液泡内。最近的研究发现,拟南芥细胞的液泡中存在多种糖基化修饰的酚醛类小分子[25]。玉米细胞会产生一种含氮苯并恶嗪衍生物,这种化合物能防御节肢动物,避免其对玉米的破坏。含氮苯并恶嗪衍生物经糖基化修饰后储存在玉米细胞的液泡内[26]
2 蛋白质的糖基修饰及其功能
2.1 维持蛋白质功能
蛋白质的糖基化修饰能够通过稳定其构象或正确定位到细胞特定位置来维持正常的功能(图3)。硫胺素是细胞线粒体中能量代谢过程必不可少的辅因子,但无法在体内直接合成,主要来源于体外摄入。最近研究发现,来源于人结肠细胞膜的硫胺素焦硫酸转运蛋白能够吸收大肠内微生物产生的硫胺素焦硫酸[27]。进一步的研究证实该转运蛋白是一种被糖基化修饰的蛋白,在加入抑制剂或者对糖基化位点进行突变之后,该转运蛋白无法维持其在细胞膜上的稳定构象,从而丧失了对硫胺素焦磷酸的吸收功能[9]。蛋白质糖基化修饰对维持细胞代谢过程平衡发挥着重要作用,蛋白质糖基化异常可引起细胞代谢过程异常甚至导致细胞死亡。对抗癌药物白藜芦醇抗癌机制的研究发现,白藜芦醇可以通过干扰卵巢癌细胞中蛋白质的N-糖基化修饰来使癌细胞凋亡[27]。通过对禾谷镰刀菌(Fusarium graminearum)的N-糖蛋白组学进行系统综合定量分析发现,经过杀菌剂处理的禾谷镰刀菌在细胞壁、细胞膜和细胞外区域的蛋白糖基化水平显著下降[10]。糖基化修饰可以将蛋白质定位到细胞的特定区域来发挥功能。KCC4是细胞膜上的协同转运蛋白,能够转运钾离子和氯离子,对调节细胞容积和维持细胞内氯离子平衡非常重要[28]。对该蛋白质的研究发现,KCC4蛋白的331位和344位的天冬酰胺上存在糖基化修饰,突变研究表明,该糖基化修饰能够将KCC4蛋白准确定位到细胞膜上,从而发挥正常的转运功能[29]。
图3
图3
转运蛋白的糖基化修饰维持其正常功能
Fig.3
Transporter protein glycosylation maintaining its normal function
1: Transporter protein unglycosylated failed in cell membrane localization; 2: Transporter protein unglycosylated cannot maintain its normal function although localized in cell membrane; 3: Mature transporter protein by glycosylated modification can be correctly positioned to the cell membrane and maintain its normal function
2.2 参与基因转录与翻译
蛋白质糖基化修饰可以通过激活或阻遏基因转录与翻译来实现对细胞内某一代谢过程的调控。细胞的癌变往往伴随着葡萄糖的过度消耗和脂肪的合成。最近有研究表明,葡萄糖介导的裂解激活蛋白SCAP发生N-糖基化修饰后能够结合促进脂肪合成的转录因子SREBPs蛋白,形成SCAP/SREBP复合体,并从内质网转移到高尔基体,再经过一系列反应过程最终激活脂肪合成基因的表达[11]。在此过程中糖基化修饰不仅激活了SCAP蛋白的功能,而且辅助SCAP/SREBP复合体实现了由内质网到高尔基体的转移和定位,最终调节目标基因的转录与翻译(图4)。KEAP1蛋白是细胞氧化应激代谢过程中的重要调控因子。该蛋白质与转录激活因子NRF2相结合,平衡NRF2在细胞中的浓度,防止过量的NRF2进入细胞核激活抗氧化靶基因的转录与表达。最近的研究表明,当KEAP1蛋白104位丝氨酸被糖基化后,会将结合在该蛋白质上的NRF2蛋白进行泛素化并进行水解,进而下调抗氧化靶基因的转录与表达[20]。
图4
图4
蛋白质糖基化反应参与基因转录与翻译[11]
Fig.4
Protein glycosylation involved in gene transcription and translation
2.3 调节细胞周期
细胞中的某些特定蛋白质的糖基化位点同时也是其他翻译后修饰位点或毗邻位点。细胞质中一些与细胞周期中蛋白质和信号转导相关蛋白的O-糖基化位点也是该蛋白质发生磷酸化的位点[31]。细胞周期中蛋白质的糖基化修饰是动态变化的,因此通过糖基化修饰来竞争性地抑制其他翻译后修饰也是蛋白质参与代谢过程中调节细胞周期的重要形式。c-Myc蛋白为细胞周期调控蛋白并且能感知细胞外营养的变化[32],在外界营养丰富或有抗原刺激的情况下,免疫T细胞会增加c-Myc蛋白的表达量[12]。c-Myc蛋白第58位苏氨酸是O-糖基化和磷酸化的竞争结合位点[33],当该位点被糖基化后,c-Myc蛋白被保护,进而可以促进细胞周期进程,使T细胞不断增殖、分化和更新来清除抗原(图5)。而当c-Myc蛋白第58位苏氨酸没有糖基保护时会被磷酸化,磷酸化后的c-Myc蛋白被降解,阻止细胞进一步增殖。
图5
2.4 参与信号转导
蛋白质的糖基化修饰还能够在细胞代谢中发挥信号转导功能,来调节细胞生长和其他多种生物过程。阿拉伯半乳糖蛋白(AGP)是植物细胞壁中的糖蛋白,对植物的生长发育、花粉管的生长及对盐类胁迫的耐受性都很重要[34]。最近的研究表明,细胞壁上的AGP蛋白被糖基化修饰后,会作为一种信号,经过信号转导,激活植物细胞内的生长因子和纤维素合酶,从而促进植物根的生长和细胞壁的形成并增强种子外壳的黏液连接功能[35]。蛋白质的糖基化反应在代谢过程中不仅具有激活作用,对某些信号通路还有抑制作用。Wnt/β-catenin 途径是信号通路的经典途径,控制多种代谢过程如细胞的生长、分化、凋亡和自我更新等。该通路作用原理为细胞外的Wnt蛋白激活细胞膜上受体使细胞内β-catenin蛋白的积累,并向核内转移。β-catenin蛋白与其他转录因子蛋白形成转录因子复合体,最终激活靶基因的表达。
图6
图6
β-catenin蛋白糖基化参与Wnt/β-catenin信号通路的转导
Fig.6
β-catenin glycosylation involved in the transduction of Wnt / β-catenin signaling pathway
3 小分子化合物的糖基修饰及其功能
3.1 清除毒性污染物
细胞在代谢过程中自身会产生一些内源小分子毒性物质,也会将外源环境中的小分子污染物,除草剂,杀虫剂和其他有毒小分子化学品摄入胞内。糖基化修饰作用是消除或降低细胞内小分子毒性物质的重要机制[37]。细胞中糖基转移酶通过对毒性小分子进行糖基化修饰,改变其生理活性从而降低或消除其细胞毒性(图7)。棉花细胞中的棉子酚是一种倍半萜烯二聚体,对昆虫有毒害作用,但有两种螟蛉虫的幼虫能够在棉花植株上生长,研究者在它们的排泄物中发现了糖基化修饰的棉子酚化合物,说明这两种昆虫的细胞内存在能够对棉子酚进行糖基化修饰的酶,通过糖基化作用消除了棉子酚的毒性[14]。上文提到的含氮苯并恶嗪衍生物同样对昆虫有毒害作用,而对其具有耐受性的昆虫也主要通过糖基化修饰作用来消除其毒性[26]。在植物细胞中,糖基转移酶的过量表达能够去除镰刀霉产生的小分子毒素脱氧雪腐镰刀菌醇[38]。
图7
图7
小分子糖基化反应及其功能
Fig.7
Small molecule metabolites glycosylation reaction and its function
3.2 参与胁迫应答反应
细胞代谢过程中会受到各种环境的胁迫,包括非生物的胁迫如机械力、温度、盐离子、干旱等,以及生物的胁迫如其他生物的入侵等。糖基化修饰小分子化合物是细胞防御反应和压力应答的重要机制之一。最近的研究表明,植物细胞中单体木质醇的糖基化修饰对细胞壁正常木质化形成木质素至关重要[39]。植物细胞的木质素是细胞壁的重要组成成分,不仅对植物细胞有机械支撑作用,可以抵抗外界机械压力,而且还能阻止细菌真菌等微生物对植物细胞的入侵[40]。研究表明,在印度人参(Withania somnifera)中过表达催化甾醇类分子糖基化的糖基转移酶WsSGTL1,使得睡茄交酯和甾醇类分子糖基化,能够促进植物生长,并提高植物的生物和非生物抗性[41]。该糖基转移酶基因在拟南芥中的表达也证明转入该基因的植物能够抵抗外界各种环境的胁迫,如热胁迫、冷胁迫和盐胁迫等[42]。植物中的花青素苷是提高植物对外界胁迫能力的另一类化合物。在拟南芥中过表达UGT79B2/B3基因,该基因编码的糖基转移酶能够将鼠李糖转移到花青素C3的羟基上形成花色素苷[43]。研究表明,随着花色素苷的积累,植物对干旱和盐胁迫的耐受性显著增强[15]。很多小分子对细胞的生长防御是十分必要的,如植物细胞会产生一些防御型小分子,阻止微生物、昆虫或其他动物入侵。拟南芥在遭到其他微生物入侵时,叶片细胞内会产生超敏应答,积累大量糖基化修饰的苯丙烷衍生物来应对其他生物入侵[15]。当玉米受到昆虫破坏时,液泡中储存的糖基化含氮苯并恶嗪衍生物会暴露到细胞质中,被细胞质中的糖苷酶水解,去糖基化后的含氮苯并恶嗪衍生物被昆虫食入后,会对昆虫产生毒害作用[44]。
3.3 调节激素平衡
细胞中的激素分子一般是亲脂类小分子,在细胞内发挥重要作用。激素水平的调节对于细胞代谢过程、生长发育和细胞对环境变化的适应性具有广泛的影响。小分子激素类化合物的糖基化修饰是调节细胞内激素水平的重要机制之一。植物细胞中除了乙烯外,其他植物激素,如生长素(IAA)、脱落酸(ABA)、细胞分裂素(CKs)、油菜素内酯(BRs)和压力胁迫相关激素水杨酸等的糖基化修饰均有报道[45]。糖基化修饰的调节机制无需从头合成激素分子,而是通过一步糖基化反应来暂时激活或阻断激素分子的功能。因此,这种调节机制能够对来自细胞内外的信号做出快速应答,并在应答过后使激素分子迅速恢复到内稳态水平。脱落酸对植物的生长发育具有重要作用,并且其作用与浓度密切相关。在拟南芥中表达UGT71C5基因,并将该基因的表达量下调,使得脱落酸在植物体内的浓度上升而其糖基化产物减少;而UGT71C5基因的过量表达,使得脱落酸浓度下降而其糖基化产物增加。因此,拟南芥中的糖基转移酶UGT71C5能够通过糖基转移作用调节脱落酸浓度,维持其在细胞中的内稳态[16]。最近在拟南芥中发现UGT74D1基因的表达产物可以调节植物生长素类的激素分子,将糖基转移至吲哚-3-丁酸(IBA)、吲哚-3-丙酸(IPA)、吲哚-3-乙酸(IAA)和萘乙酸等生长素类的激素分子上[46]。
4 结论与展望
糖基化反应是细胞代谢过程中的一类重要反应,代谢过程中产生的生物大分子和小分子化合物都能被糖基化修饰。糖基转移反应参与多种细胞生物过程,对细胞正常生长发育,应对复杂多变的外界环境具有重要作用。糖基转移反应主要由糖基转移酶催化完成,目前关于糖基转移酶的研究主要集中在糖基转移酶的挖掘和生理化学特性的表征层面,较少涉及其在细胞代谢网络中的综合作用,而对于细胞代谢网络中糖基化修饰的功能研究对于我们了解相关疾病的致病机制及药物开发至关重要。例如,癌细胞中某些特殊蛋白质的异常糖基化修饰能够为疾病的早期诊断提供依据[49]。对某些致病微生物的糖基转移作用的研究有助于开发和研制相应糖基转移酶的抑制剂,用于治疗由该致病菌引起的病变[50]。在药物开发方面,糖基化的蛋白质药物和小分子药物也越来越受到关注。免疫球蛋白(IgG)和单克隆抗体(mAb)等蛋白质药物的糖基化修饰对其功效、稳定性和效应功能至关重要[51,52,53]。因此,如何利用糖基化修饰得到糖型均一、质量可靠的蛋白质药物是今后研究的热点和难点。而小分子药物的糖基修饰可以增强其靶向作用、提高生物利用度、增强水溶性、增强药效和降低副作用,是今后小分子药物改造的重要方式之一[54]。
酶作为一种高效、环境友好的催化剂被广泛应用于工业催化生产过程。对酶分子的糖基化修饰可以增加其结构的稳定性,降低工业生产成本[55],为今后利用蛋白质工程手段改造工业酶制剂提供了新思路。随着不同种类和功能的糖基转移酶的发现,利用微生物细胞工厂生产糖基化修饰的高附加值产品,将成为今后工业催化生产的重要内容之一。另外,酶法糖基化也是改善食品添加剂的重要手段。目前已报道了糖基化反应对甜菊苷、橙皮苷及芦丁苷等食品添加剂的改性研究[56]。糖基化用于食品改性的研究虽然刚刚起步,却已展现出广阔的应用前景。此外,农业上对糖基化修饰在植物抗逆和抗病虫过程中作用机制的研究能够有效指导农作物和植物的遗传改良、防病抗虫等工作。
参考文献
Biotechnological advances in UDP-sugar based glycosylation of small molecules
,Glycosylation of small molecules like specialized (secondary) metabolites has a profound impact on their solubility, stability or bioactivity, making glycosides attractive compounds as food additives, therapeutics or nutraceuticals. The subsequently growing market demand has fuelled the development of various biotechnological processes, which can be divided in the in vitro (using enzymes) or in vivo (using whole cells) production of glycosides. In this context, uridine glycosyltransferases (UGTs) have emerged as promising catalysts for the regio- and stereoselective glycosylation of various small molecules, hereby using uridine diphosphate (UDP) sugars as activated glycosyldonors. This review gives an extensive overview of the recently developed in vivo production processes using UGTs and discusses the major routes towards UDP-sugar formation. Furthermore, the use of interconverting enzymes and glycorandomization is highlighted for the production of unusual or new-to-nature glycosides. Finally, the technological challenges and future trends in UDP-sugar based glycosylation are critically evaluated and summarized.
Protein glycosylation in development and disease
,Abstract N- and O-linked glycan structures of cell surface and secreted glycoproteins serve a variety of functions related to cell-cell communication in systems affecting development and disease. The more sophisticated N-glycan biosynthesis pathway of metazoans diverges from that of yeast with the appearance of the medial-Golgi beta-N-acetylglucosaminyltransferases (GlcNAc-Ts). Tissue-specific regulation of medial- and trans-Golgi glycosyltransferases contribute structural diversity to glycoproteins in metazoans, and this can affect their molecular properties including localization, half-life, and biological activity. Null mutations in glycosyltransferase genes positioned later in the biosynthetic pathway disrupt expression of smaller subsets of glycan structures and are progressively milder in phenotype. In this review, we examine data on targeted mutations affecting glycosylation in mice and congenital mutations in man, with a view to understanding the molecular functions of glycan structures as modulators of glycoprotein activity. Finally, pathology associated with the expression of GlcNAc-Ts in cancer and diabetes-induced cardiac hypertrophy suggest that inhibitors of these enzymes may have therapeutic value.
Plant secondary metabolism linked glycosyltransferases: An update on expanding knowledge and scopes
,Abstract The multigene family of enzymes known as glycosyltransferases or popularly known as GTs catalyze the addition of carbohydrate moiety to a variety of synthetic as well as natural compounds. Glycosylation of plant secondary metabolites is an emerging area of research in drug designing and development. The unsurpassing complexity and diversity among natural products arising due to glycosylation type of alterations including glycodiversification and glycorandomization are emerging as the promising approaches in pharmacological studies. While, some GTs with broad spectrum of substrate specificity are promising candidates for glycoengineering while others with stringent specificity pose limitations in accepting molecules and performing catalysis. With the rising trends in diseases and the efficacy/potential of natural products in their treatment, glycosylation of plant secondary metabolites constitutes a key mechanism in biogeneration of their glycoconjugates possessing medicinal properties. The present review highlights the role of glycosyltransferases in plant secondary metabolism with an overview of their identification strategies, catalytic mechanism and structural studies on plant GTs. Furthermore, the article discusses the biotechnological and biomedical application of GTs ranging from detoxification of xenobiotics and hormone homeostasis to the synthesis of glycoconjugates and crop engineering. The future directions in glycosyltransferase research should focus on the synthesis of bioactive glycoconjugates via metabolic engineering and manipulation of enzyme's active site leading to improved/desirable catalytic properties. The multiple advantages of glycosylation in plant secondary metabolomics highlight the increasing significance of the GTs, and in near future, the enzyme superfamily may serve as promising path for progress in expanding drug targets for pharmacophore discovery and development.
Glycosylation in cellular mechanisms of health and disease
,Glycosylation produces an abundant, diverse, and highly regulated repertoire of cellular glycans that are frequently attached to proteins and lipids. The past decade of research on glycan function has revealed that the enzymes responsible for glycosylation-the glycosyltransferases and glycosidases-are essential in the development and physiology of living organisms. Glycans participate in many key biological processes including cell adhesion, molecular trafficking and clearance, receptor activation, signal transduction, and endocytosis. This review discusses the increasingly sophisticated molecular mechanisms being discovered by which mammalian glycosylation governs physiology and contributes to disease.
A classification of nucleotide-diphospho-sugar glycosyltransferases based on amino acid sequence similarities
,We have studied the effects of chromomycin and of a triple-helix-forming oligonucleotide (TFO) that recognizes Sp1 binding sites on protein-DNA interactions and HIV-1 transcription. Molecular interactions between chromomycin, the Spl TFO and target DNA sequences were studied by gel retardation, tripler affinity capture using streptavidin-coated magnetic beads and biosensor technology. We also determined whether chromomycin and a TFO recognizing the Spl binding sites of the HIV-I long terminal repeat (LTR) inhibit the activity of restriction enzyme HaeIII, which recognizes a sequence (5'-GGCC-3') located within these Sp I binding sites. The effects of chromomycin and the TFO on the interaction between nuclear proteins or purified Spl and a double-stranded oligonucleotide containing the Spl binding sites of the HIV-I LTR were studied by gel retardation. The effects of both chromomycin and TFO on transcription were studied by using an HIV-I LTR-directed in vitro transcription system. Our results indicate that low concentrations of chromomycin potentiate the effects of the Spl TFO in inhibiting protein-DNA interactions and HIV-l-LTR-directed transcription. In addition, low concentrations of chromomycin do not affect binding of the TFO to target DNA molecules. The results presented here support the hypothesis that both DNA binding drugs and TFOs can be considered as sequence-selective modifiers of DNA-protein interactions, possibly leading to specific alterations of biological functions. In particular, the combined use of chromomycin and TFOs recognizing Spl binding sites could be employed in order to abolish the biological functions of promoters (such as the HIV-I LTR) whose activity is potentiated by interactions with the promoter-specific transcription factor Sp1.
An evolving hierarchical family classification for glycosyltransferases
,Glycosyltransferases are a ubiquitous group of enzymes that catalyse the transfer of a sugar moiety from an activated sugar donor onto saccharide or non-saccharide acceptors. Although many glycosyltransferases catalyse chemically similar reactions, presumably through transition states with substantial oxocarbenium ion character, they display remarkable diversity in their donor, acceptor and product specificity and thereby generate a potentially infinite number of glycoconjugates, oligo- and polysaccharides. We have performed a comprehensive survey of glycosyltransferase-related sequences (over 7200 to date) and present here a classification of these enzymes akin to that proposed previously for glycoside hydrolases, into a hierarchical system of families, clans, and folds. This evolving classification rationalises structural and mechanistic investigation, harnesses information from a wide variety of related enzymes to inform cell biology and overcomes recurrent problems in the functional prediction of glycosyltransferase-related open-reading frames.
UGT) superfamily expressed in humans, insects and plants: Animal-plant arms-race and co-evolution
,UDP-glycosyltransferases (UGTs) are major phase II enzymes of a detoxification system evolved in all kingdoms of life. Lipophilic endobiotics such as hormones and xenobiotics including phytoalexins and drugs are conjugated by vertebrates mainly with glucuronic acid, by invertebrates and plants mainly with glucose. Plant鈥揾erbivore arms-race has been the major driving force for evolution of large UGT and other enzyme superfamilies. The UGT superfamily is defined by a common protein structure and signature sequence of 44 amino acids responsible for binding the UDP moiety of the sugar donor. Plants developed toxic phytoalexins stored as glucosides. Upon herbivore attack these conjugates are converted to highly reactive compounds. In turn, animals developed large families of UGTs in their intestine and liver to detoxify these phytoalexins. Interestingly, phytoalexins, exemplified by quercetin glucuronides and glucosinolate-derived isocyanates, are known insect attractant pigments in plants, and antioxidants, anti-inflammatory and chemopreventive compounds of humans. It is to be anticipated that phytochemicals may provide a rich source in beneficial drugs.
Glycosyltransferases: mechanisms and applications in natural product development
,Glycosylation reactions mainly catalyzed by glycosyltransferases (Gts) occur almost everywhere in the biosphere, and always play crucial roles in vital processes. In order to understand the full potential of Gts, the chemical and structural glycosylation mechanisms are systematically summarized in this review, incl
Comprehensive quantification of N-glycoproteome in Fusarium graminearum reveals intensive glycosylation changes against fungicide
,We developed a robust HILIC-based system for N -glycoproteome quantification in fungus and established the largest quantitative N -glycosylation dataset in fungus, showing the high performance of the new system. The identified N -glycoproteins were proved to be high confident due to the high percentage of proteins in extracellular region and plasma. The quantification results were also accuracy and reproducible in two replicates. By the help of advanced bioinformatic tools, the obtained data was systematically analyzed. It was found that the N -glycosylation level was largely changed in cell wall, membrane and extracellular regions. Moreover, the cell metabolism, protein synthesis, and protease activity were also greatly deceased after fungicide treatment.
Glucose-mediated N-glycosylation of SCAP is essential for SREBP-1 activation and tumor growth
,Tumorigenesis is associated with increased glucose consumption and lipogenesis, but how these pathways are interlinked is unclear. Here, we delineate a pathway in which EGFR signaling, by increasing glucose uptake, promotes N-glycosylation of sterol regulatory element-binding protein (SREBP) cleavage-activating protein (SCAP) and consequent activation of SREBP-1, an ER-bound transcription factor with central roles in lipid metabolism. Glycosylation stabilizes SCAP and reduces its association with Insig-1, allowing movement of SCAP/SREBP to the Golgi and consequent proteolytic activation of SREBP. Xenograft studies reveal that blocking SCAP N-glycosylation ameliorates EGFRvIII-driven glioblastoma growth. Thus, SCAP acts as key glucose-responsive protein linking oncogenic signaling and fuel availability to SREBP-dependent lipogenesis. Targeting SCAP N-glycosylation may provide a promising means of treating malignancies and metabolic diseases.
Glucose and glutamine fuel protein O-GlcNAcylation to control T cell self-renewal and malignancy
,Abstract Sustained glucose and glutamine transport are essential for activated T lymphocytes to support ATP and macromolecule biosynthesis. We found that glutamine and glucose also fuel an indispensable dynamic regulation of intracellular protein O-GlcNAcylation at key stages of T cell development, transformation and differentiation. Glucose and glutamine are precursors of uridine diphosphate N-acetylglucosamine (UDP-GlcNAc), a substrate for cellular glycosyltransferases. Immune-activated T cells contained higher concentrations of UDP-GlcNAc and increased intracellular protein O-GlcNAcylation controlled by the enzyme O-linked- -N-acetylglucosamine (O-GlcNAc) glycosyltransferase as compared with naive cells. We identified Notch, the T cell antigen receptor and c-Myc as key controllers of T cell protein O-GlcNAcylation via regulation of glucose and glutamine transport. Loss of O-GlcNAc transferase blocked T cell progenitor renewal, malignant transformation and peripheral T cell clonal expansion. Nutrient-dependent signaling pathways regulated by O-GlcNAc glycosyltransferase are thus fundamental for T cell biology.
NRAGE induces beta-catenin/Arm O-GlcNAcylation and negatively regulates Wnt signaling
,Abstract The Wnt pathway is crucial for animal development, as well as tumor formation. Understanding the regulation of Wnt signaling will help to elucidate the mechanism of the cell cycle, cell differentiation and tumorigenesis. It is generally accepted that in response to Wnt signals, β-catenin accumulates in the cytoplasm and is imported into the nucleus where it recruits LEF/TCF transcription factors to activate the expression of target genes. In this study, we report that human NRAGE, a neurotrophin receptor p75 (p75NTR) binding protein, markedly suppresses the expression of genes activated by the Wnt pathway. Consistent with this finding, loss of function of NRAGE by RNA interference (RNAi) activates the Wnt pathway. Moreover, NRAGE suppresses the induction of axis duplication by microinjected β-catenin in Xenopus embryos. To our surprise, NRAGE induces nuclear localization of β-catenin and increases its DNA binding ability. Further studies reveal that NRAGE leads to the modification of β-catenin/Arm with O-linked beta-N-acetylglucosamine (O-GlcNAc), and failure of the association between β-catenin/Arm and pygopus(pygo) protein, which is required for transcriptional activation of Wnt target genes. Therefore, our findings suggest a novel mechanism for regulating Wnt signaling.
Potential detoxification of gossypol by UDP-glycosyltransferases in the two Heliothine moth species Helicoverpa armigera and Heliothis virescens
,Abstract The cotton bollworm Helicoverpa armigera and the tobacco budworm Heliothis virescens are closely related generalist insect herbivores and serious pest species on a number of economically important crop plants including cotton. Even though cotton is well defended by its major defensive compound gossypol, a toxic sesquiterpene dimer, larvae of both species are capable of developing on cotton plants. In spite of severe damage larvae cause on cotton plants, little is known about gossypol detoxification mechanisms in cotton-feeding insects. Here, we detected three monoglycosylated and up to five diglycosylated gossypol isomers in the feces of H.0002armigera and H.0002virescens larvae fed on gossypol-supplemented diet. Candidate UDP-glycosyltransferase (UGT) genes of H.0002armigera were selected by microarray studies and in silico analyses and were functionally expressed in insect cells. In enzymatic assays, we show that UGT41B3 and UGT40D1 are capable of glycosylating gossypol mainly to the diglycosylated gossypol isomer 5 that is characteristic for H.0002armigera and is absent in H.0002virescens feces. In conclusion, our results demonstrate that gossypol is partially metabolized by UGTs via glycosylation, which might be a crucial step in gossypol detoxification in generalist herbivores utilizing cotton as host plant.
Soluble phenylpropanoids are involved in the defense response of Arabidopsis against Verticillium longisporum
,Abstract Verticillium longisporum is a soil-borne vascular pathogen causing economic loss in rape. Using the model plant Arabidopsis this study analyzed metabolic changes upon fungal infection in order to identify possible defense strategies of Brassicaceae against this fungus. Metabolite fingerprinting identified infection-induced metabolites derived from the phenylpropanoid pathway. Targeted analysis confirmed the accumulation of sinapoyl glucosides, coniferin, syringin and lignans in leaves from early stages of infection on. At later stages, the amounts of amino acids increased. To test the contribution of the phenylpropanoid pathway, mutants in the pathway were analyzed. The sinapate-deficient mutant fah1-2 showed stronger infection symptoms than wild-type plants, which is most likely due to the lack of sinapoyl esters. Moreover, the coniferin accumulating transgenic plant UGT72E2-OE was less susceptible. Consistently, sinapoyl glucose, coniferyl alcohol and coniferin inhibited fungal growth and melanization in vitro, whereas sinapyl alcohol and syringin did not. The amount of lignin was not significantly altered supporting the notion that soluble derivatives of the phenylpropanoid pathway contribute to defense. These data show that soluble phenylpropanoids are important for the defense response of Arabidopsis against V.longisporum and that metabolite fingerprinting is a valuable tool to identify infection-relevant metabolic markers.
UDP-glucosyltransferase71C5, a major glucosyltransferase, mediates abscisic acid homeostasis in Arabidopsis
,Abstract Abscisic acid (ABA) plays a key role in plant growth and development. The effect of ABA in plants mainly depends on its concentration, which is determined by a balance between biosynthesis and catabolism of ABA. In this study, we characterize a unique UDP-glucosyltransferase (UGT), UGT71C5, which plays an important role in ABA homeostasis by glucosylating ABA to abscisic acid -: glucose ester (GE) in Arabidopsis (Arabidopsis thaliana). Biochemical analyses show that UGT71C5 glucosylates ABA in vitro and in vivo. Mutation of UGT71C5 and down-expression of UGT71C5 in Arabidopsis cause delay in seed germination and enhanced drought tolerance. In contrast, overexpression of UGT71C5 accelerates seed germination and reduces drought tolerance. Determination of the content of ABA and ABA-GE in Arabidopsis revealed that mutation in UGT71C5 and down-expression of UGT71C5 resulted in increased level of ABA and reduced level of ABA-GE, whereas overexpression of UGT71C5 resulted in reduced level of ABA and increased level of ABA-GE. Furthermore, altered levels of ABA in plants lead to changes in transcript abundance of ABA-responsive genes, correlating with the concentration of ABA regulated by UGT71C5 in Arabidopsis. Our work shows that UGT71C5 plays a major role in ABA glucosylation for ABA homeostasis.
Glycobiology: Progress, problems, and perspectives
,This review highlights different aspects of glycobiology with analysis of recent progress in the study of biosynthesis, degradation, and biological role of glycoconjugates and of hereditary diseases related to the metabolism of these compounds. In addition, the review presents some analysis of the papers of other authors who have contributed to this special issue.
A little sugar goes a long way: The cell biology of O-GlcNAc
,Unlike the complex glycans decorating the cell surface, the O-linked 尾-N-acetyl glucosamine (O-GlcNAc) modification is a simple intracellular Ser/Thr-linked monosaccharide that is important for disease-relevant signaling and enzyme regulation. O-GlcNAcylation requires uridine diphosphate-GlcNAc, a precursor responsive to nutrient status and other environmental cues. Alternative splicing of the genes encoding the O-GlcNAc cycling enzymes O-GlcNAc transferase (OGT) and O-GlcNAcase (OGA) yields isoforms targeted to discrete sites in the nucleus, cytoplasm, and mitochondria. OGT and OGA also partner with cellular effectors and act in tandem with other posttranslational modifications. The enzymes of O-GlcNAc cycling act preferentially on intrinsically disordered domains of target proteins impacting transcription, metabolism, apoptosis, organelle biogenesis, and transport.
Concepts and principles of O-linked glycosylation
,The biosynthesis, structures, and functions of O-glycosylation, as a complex posttranslational event, is reviewed and compared for the various types of O-glycans. Mucin-type O-glycosylation is initiated by tissue-specific addition of a GalNAc-residue to a serine or a threonine of the fully folded protein. This event is dependent on the primary, secondary, and tertiary structure of the glycoprotein. Further elongation and termination by specific transferases is highly regulated. We also describe some of the physical and biological properties that O-glycosylation confers on the protein to which the sugars are attached. These include providing the basis for rigid conformations and for protein stability. Clustering of O-glycans in Ser/Thr(/Pro)-rich domains allows glycan determinants such as sialyl Lewis X to be presented as multivalent ligands, essential for functional recognition. An additional level of regulation, imposed by exon shuffling and alternative splicing of mRNA, results in the expression of proteins that differ only by the presence or absence of Ser/Thr(/Pro)-rich domains. These domains may serve as protease-resistant spacers in cell surface glycoproteins. Further biological roles for O-glycosylation discussed include the role of isolated mucin-type O-glycans in recognition events (e.g., during fertilization and in the immune response) and in the modulation of the activity of enzymes and signaling molecules. In some cases, the O-linked oligosac-charides are necessary for glycoprotein expression and processing. In contrast to the more common mucin-type O-glycosylation, some specific types of O-glycosylation, such as the O-linked attachment of fucose and glucose, are sequon dependent. The reversible attachment of O-linked GlcNAc to cytoplasmic and nuclear proteins is thought to play a regulatory role in protein function. The recent development of novel technologies for glycan analysis promises to yield new insights in the factors that determine site occupancy, structure-function relationship, and the contribution of O-linked sugars to physiological and pathological processes. These include diseases where one or more of the O-glycan processing enzymes are aberrantly regulated or deficient, such as HEMPAS and cancer.
Glycosylation quality control by the golgi structure
,Glycosylation is a ubiquitous modification that occurs on proteins and lipids in all living cells. Consistent with their high complexity, glycans play crucial biological roles in protein quality control and recognition events. Asparagine-linked protein N -glycosylation, the most complex glycosylation, initiates in the endoplasmic reticulum and matures in the Golgi apparatus. This process not only requires an accurate distribution of processing machineries, such as glycosyltransferases, glycosidases, and nucleotide sugar transporters, but also needs an efficient and well-organized factory that is responsible for the fidelity and quality control of sugar chain processing. In addition, accurate glycosylation must occur in coordination with protein trafficking and sorting. These activities are carried out by the Golgi apparatus, a membrane organelle in the center of the secretory pathway. To accomplish these tasks, the Golgi has developed into a unique stacked structure of closely aligned, flattened cisternae in which Golgi enzymes reside; in mammalian cells, dozens of Golgi stacks are often laterally linked into a ribbon-like structure. Here, we review our current knowledge of how the Golgi structure is formed and why its formation is required for accurate glycosylation, with the focus on how the Golgi stacking factors GRASP55 and GRASP65 generate the Golgi structure and how the conserved oligomeric Golgi complex maintains Golgi enzymes in different Golgi subcompartments by retrograde protein trafficking.
Roles of glycans and glycopeptides in immune system and immune-related diseases
,Almost all of the key molecules in organisms involved in the innate and adaptive immune response (including immunoglobulins, cytokines and cytokine receptors, complements, CD molecules, adhesions, Tcell receptors and major histocompatibility complex molecules) are glycoproteins. Besides, foreign antigens, such as many viral envelope proteins, are glycoproteins too. Carbohydrates attached to proteins or peptides are classified by the nature of their linkages to the protein, mostly as either N-linked (N-acetylglucosamine to asparagines) or O-linked (N-acetylgalactosamine to serine or threonine) oligosaccharides. The glycans have three major roles: firstly, the sugars confer stability on the proteins to which they are attached, protecting them from proteases and non-specific protein-protein interactions. Secondly, glycans play key roles in signal transduction, control of cell development and differentiation. Thirdly, specific regions of the oligosaccharide chains provide recognition epitopes, which influence innate and adaptive immune responses. Glycopeptides not only provide specific oligosaccharides, but also have specific information of amino acids sequences. The glycans and glycopeptides not only influence the structure and functions of immune molecules, but also influence the immune response. In addition, changes in glycans or glycopeptides may have a significant role in a variety of human immune-related diseases, such as rheumatoid, autoimmune disease, Wiskott-Aldrich syndrome, infection disease, cancer, etc. In this article, the roles of N-, O-glycans and glycopeptides in immune system and immune-related diseases are discussed. The potential therapeutic significance of the information is also mentioned.
Role of glycosylation of Notch in development
,Abstract Researchers have long predicted that complex carbohydrates on cell surfaces would play important roles in developmental processes because of the observation that specific carbohydrate structures appear in specific spatial and temporal patterns throughout development. The astounding number and complexity of carbohydrate structures on cell surfaces added support to the concept that glycoconjugates would function in cellular communication during development. Although the structural complexity inherent in glycoconjugates has slowed advances in our understanding of their functions, the complete sequencing of the genomes of organisms classically used in developmental studies (e.g., mice, Drosophila melanogaster, and Caenorhabditis elegans) has led to demonstration of essential functions for a number of glycoconjugates in developmental processes. Here we present a review of recent studies analyzing function of a variety of glycoconjugates (O-fucose, O-mannose, N-glycans, mucin-type O-glycans, proteoglycans, glycosphingolipids), focusing on lessons learned from human disease and genetic studies in mice, D. melanogaster, and C. elegans.
Glycosyltransferases: managers of small molecules
,Studies of the glycosyltransferases (GTs) of small molecules have greatly increased in recent years as new approaches have been used to identify their genes and characterize their catalytic activities. These enzymes recognize diverse acceptors, including plant metabolites, phytotoxins and xenobiotics. Glycosylation alters the hydrophilicity of the acceptors, their stability and chemical properties, their subcellular localisation and often their bioactivity. Considerable progress has been made in understanding the role of GTs in the plant and the utility of GiTs as biocatalysts, the latter arising from their regio- and enantioselectivity and their ability to recognize substrates that are not limited to plant metabolites.
Coordinate regulation of metabolite glycosylation and stress hormone biosynthesis by TT8 in Arabidopsis
,Abstract Secondary metabolites play a key role in coordinating ecology and defense strategies of plants. Diversity of these metabolites arises by conjugation of core structures with diverse chemical moieties, such as sugars in glycosylation. Active pools of phytohormones, including those involved in plant stress response, are also regulated by glycosylation. While much is known about the enzymes involved in glycosylation, we know little about their regulation or coordination with other processes. We characterized the flavonoid pathway transcription factor TRANSPARENT TESTA8 (TT8) in Arabidopsis (Arabidopsis thaliana) using an integrative omics strategy. This approach provides a systems-level understanding of the cellular machinery that is used to generate metabolite diversity by glycosylation. Metabolomics analysis of TT8 loss-of-function and inducible overexpression lines showed that TT8 coordinates glycosylation of not only flavonoids, but also nucleotides, thus implicating TT8 in regulating pools of activated nucleotide sugars. Transcriptome and promoter network analyses revealed that the TT8 regulome included sugar transporters, proteins involved in sugar binding and sequestration, and a number of carbohydrate-active enzymes. Importantly, TT8 affects stress response, along with brassinosteroid and jasmonic acid biosynthesis, by directly binding to the promoters of key genes of these processes. This combined effect on metabolite glycosylation and stress hormones by TT8 inducible overexpression led to significant increase in tolerance toward multiple abiotic and biotic stresses. Conversely, loss of TT8 leads to increased sensitivity to these stresses. Thus, the transcription factor TT8 is an integrator of secondary metabolism and stress response. These findings provide novel approaches to improve broad-spectrum stress tolerance.
Small glycosylated lignin oligomers are stored in Arabidopsis leaf vacuoles
,Lignin is an aromatic polymer derived from the combinatorial coupling of monolignol radicals in the cell wall. Recently, various glycosylated lignin oligomers have been revealed in Arabidopsis thaliana. Given that monolignol oxidation and monolignol radical coupling are known to occur in the apoplast, and glycosylation in the cytoplasm, it raises questions about the subcellular localization of glycosylated lignin oligomer biosynthesis and their storage. By metabolite profiling of Arabidopsis leaf vacuoles, we show that the leaf vacuole stores a large number of these small glycosylated lignin oligomers. Their structural variety and the incorporation of alternative monomers, as observed in Arabidopsis mutants with altered monolignol biosynthesis, indicate that they are all formed by combinatorial radical coupling. In contrast to the common believe that combinatorial coupling is restricted to the apoplast, we hypothesized that the aglycones of these compounds are made within the cell. To investigate this, leaf protoplast cultures were cofed with 13C6-labeled coniferyl alcohol and a 13C4-labeled dimer of coniferyl alcohol. Metabolite profiling of the cofed protoplasts provided strong support for the occurrence of intracellular monolignol coupling. We therefore propose a metabolic pathway involving intracellular combinatorial coupling of monolignol radicals, followed by oligomer glycosylation and vacuolar import, which shares characteristics with both lignin and lignan biosynthesis.
3-beta-D-glucopyranosyl-6-methoxy-2-benzoxazolinone (MBOA-N-Glc) is an insect detoxification product of maize 1,4-benzoxazin-3-ones
,Abstract In order to defend themselves against arthropod herbivores, maize plants produce 1,4-benzoxazin-3-ones (BXs), which are stored as weakly active glucosides in the vacuole. Upon tissue disruption, BXs come into contact with 0205-glucosidases, resulting in the release of active aglycones and their breakdown products. While some aglycones can be reglucosylated by specialist herbivores, little is known about how they detoxify BX breakdown products. Here we report on the structure of an N-glucoside, 3-0205-d-glucopyranosyl-6-methoxy-2-benzoxazolinone (MBOA-N-Glc), purified from Spodoptera frugiperda faeces. In vitro assays showed that MBOA-N-Glc is formed enzymatically in the insect gut using the BX breakdown product 6-methoxy-2-benzoxazolinone (MBOA) as precursor. While Spodoptera littoralis and S. frugiperda caterpillars readily glucosylated MBOA, larvae of the European corn borer Ostrinia nubilalis were hardly able to process the molecule. Accordingly, Spodoptera caterpillar growth was unaffected by the presence of MBOA, while O. nubilalis growth was reduced. We conclude that glucosylation of MBOA is an important detoxification mechanism that helps insects tolerate maize BXs.
Resveratrol triggers ER stress-mediated apoptosis by disrupting N-linked glycosylation of proteins in ovarian cancer cells
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K-CI cotransport: Properties and molecular mechanism
,K-Cl cotransport (COT), defined first in red blood cells as the Cl-dependent, ouabain-insensitive bidirectional K transport, encoded by at least four KCC (kalium-chloride-cotransport) genes, is now recognized as a functional and structural reality in all cell membranes. As functional system, K-Cl COT is necessary for volume and ionic homeostasis. Since its original discovery by swelling red cells in hyposmotic solutions and by treatment with N-ethylmaleimide (NEM), K-Cl COT has been recognized as one of the prime electroneutral, low ion affinity pathways effecting regulatory volume decrease (RVD). This review first summarizes the general properties of K-Cl COT, including ion dependence, kinetics, thermodynamics and regulation in erythrocytes of various species, and then focuses on the newest findings of the molecular mechanisms behind K-Cl COT, the KCC isoforms and their expression in epithelial cells and in Xenopus oocytes. Based on early biophysical studies on red cells amalgamated with the recent molecular expression studies of the four KCC isoforms, K-Cl COT emerges as one of the oldest membrane transporters that is controlled by a complex redox-dependent cascade of kinases and phosphatases, yet to be defined at the molecular level. Whereas RVD is a primeval role of K-Cl COT for survival of cells challenged by hyposmotic environments, maintenance of intracellular Cl ([Cl]I ) levels away from electrochemical equilibrium and K buffering capability during neuronal function are new additions to the list of physiological functions of this system.
Glycosylation regulates the function and membrane localization of KCC4. Biochimica Et Biophysica Acta-
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36(15):2233-2250
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Glycosylation of nucleocytoplasmic proteins: Signal transduction and O-GlcNAc
,Abstract The dynamic glycosylation of serine or threonine residues on nuclear and cytosolic proteins by O-linked beta-N-acetylglucosamine (O-GlcNAc) is abundant in all multicellular eukaryotes. On several proteins, O-GlcNAc and O-phosphate alternatively occupy the same or adjacent sites, leading to the hypothesis that one function of this saccharide is to transiently block phosphorylation. The diversity of proteins modified by O-GlcNAc implies its importance in many basic cellular and disease processes. Here we systematically examine the current data implicating O-GlcNAc as a regulatory modification important to signal transduction cascades.
Facilitative glucose transporters: Implications for cancer detection, prognosis and treatment. Metabolism-Clinical and
,It is long recognized that cancer cells display increased glucose uptake and metabolism. In a rate-limiting step for glucose metabolism, the glucose transporter (GLUT) proteins facilitate glucose uptake across the plasma membrane. Fourteen members of the GLUT protein family have been identified in humans. This review describes the major characteristics of each member of the GLUT family and highlights evidence of abnormal expression in tumors and cancer cells. The regulation of GLUTs by key proliferation and pro-survival pathways including the phosphatidylinositol 3-kinase (PI3K)-Akt, hypoxia-inducible factor-1 (HIF-1), Ras, c-Myc and p53 pathways is discussed. The clinical utility of GLUT expression in cancer has been recognized and evidence regarding the use of GLUTs as prognostic or predictive biomarkers is presented. GLUTs represent attractive targets for cancer therapy and this review summarizes recent studies in which GLUT1, GLUT3, GLUT5 and others are inhibited to decrease cancer growth.
Single cell tuning of Myc expression by antigen receptor signal strength and interleukin-2 in T lymphocytes
,Myc controls the metabolic reprogramming that supports effector T cell differentiation. The expression of Myc is regulated by the T cell antigen receptor (TCR) and pro-inflammatory cytokines such as interleukin-2 (IL-2). We now show that the TCR is a digital switch for Myc mRNA and protein expression that allows the strength of the antigen stimulus to determine the frequency of Tcells that express Myc. IL-2 signalling strength also directs Myc expression but in an analogue process that fine-tunes Myc quantity in individual cells via post-transcriptional control of Myc protein. Fine-tuning Myc matters and is possible as Myc protein has a very short half-life in T cells due to its constant phosphorylation by glycogen synthase kinase 3 (GSK3) and subsequent proteasomal degradation. We show that Myc only accumulates in T cells exhibiting high levels of amino acid uptake allowing T cells to match Myc expression to biosynthetic demands. The combination of digital and analogue processes allows tight control of Myc expression at the population and single cell level during immune responses.
3(140):1-10
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Sugar coating: bacterial protein glycosylation and host-microbe interactions
,Bacterial surfaces are rich in glycoconjugates such as capsules, lipopolysaccharides, and peptidoglycans. The discovery of prokaryotic protein glycosylation systems has revealed that many bacteria also have the capacity to synthesise a diverse array of protein glycans, in some cases using novel strategies that differ from those of eukaryotes. Despite advances in our understanding of glycan biosynthesis and the proteins that are targets of glycosylation in bacteria, the roles of these modifications are relatively less well explored. We present an overview of bacterial protein glycosylation systems in bacteria that are relevant to human health, and discuss current evidence which indicates that glycosylation of proteins may impact upon fundamental processes such as bacterial motility, adhesion, and the modulation of immune responses.
Non-target-site herbicide resistance: a family business
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Detoxification of the Fusarium mycotoxin deoxynivalenol by a UDP-glucosyltransferase from Arabidopsis thaliana. Journal of
,Plant pathogenic fungi of the genus Fusarium cause agriculturally important diseases of small grain cereals and maize. Trichothecenes are a class of mycotoxins produced by different Fusarium species that inhibit eukaryotic protein biosynthesis and presumably interfere with the expression of genes induced during the defense response of the plants. One of its members, deoxynivalenol, most likely acts as a virulence factor during fungal pathogenesis and frequently accumulates in grain to levels posing a threat to human and animal health. We report the isolation and characterization of a gene from Arabidopsis thaliana encoding a UDP-glycosyltransferase that is able to detoxify deoxynivalenol. The enzyme, previously assigned the identifier UGT73C5, catalyzes the transfer of glucose from UDP-glucose to the hydroxyl group at carbon 3 of deoxynivalenol. Using a wheat germ extract-coupled transcription/translation system we have shown that this enzymatic reaction inactivates the mycotoxin. This deoxynivalenol-glucosyltransferase (DOGT1) was also found to detoxify the acetylated derivative 15-acetyl-deoxynivalenol, whereas no protective activity was observed against the structurally similar nivalenol. Expression of the glucosyltransferase is developmentally regulated and induced by deoxynivalenol as well as salicylic acid, ethylene, and jasmonic acid. Constitutive overexpression in Arabidopsis leads to enhanced tolerance against deoxynivalenol.
UDP-glycosyltransferase 72B1 catalyzes the glucose conjugation of monolignols and is essential for the normal cell wall lignification in Arabidopsis thaliana
,Summary Glycosylation of monolignols has been found to be widespread in land plants since the 1970s. However, whether monolignol glycosylation is crucial for cell wall lignification and how it exerts effects are still unknown. Here, we report the identification of a mutant ugt72b1 showing aggravated and ectopic lignification in floral stems along with arrested growth and anthocyanin accumulation. Histochemical assays and thioacidolysis analysis confirmed the enhanced lignification and increased lignin biosynthesis in the ugt72b1 mutant. The loss of UDP-glycosyltransferase UGT72B1 function was responsible for the lignification phenotype, as demonstrated by complementation experiments. Enzyme activity analysis indicated that UGT72B1 could catalyze the glucose conjugation of monolignols, especially coniferyl alcohol and coniferyl aldehyde, which was confirmed by analyzing monolignol glucosides of UGT72B1 transgenic plants. Furthermore, the UGT72B1 gene was strongly expressed in young stem tissues, especially xylem tissues. However, UGT72B1 paralogs, such as UGT72B2 and UGT72B3, had weak enzyme activity toward monolignols and weak expression in stem tissues. Transcriptomic profiling showed that UGT72B1 knockout resulted in extensively increased transcript levels of genes involved in monolignol biosynthesis, lignin polymerization and cell wall-related transcription factors, which was confirmed by quantitative real-time PCR assays. These results provided evidence that monolignol glucosylation catalyzed by UGT72B1 was essential for normal cell wall lignification, thus offering insight into the molecular mechanism of cell wall development and cell wall lignification.
The cell biology of lignification in higher plants
,Lignin is a polyphenolic polymer that strengthens and waterproofs the cell wall of specialized plant cell types. Lignification is part of the normal differentiation programme and functioning of specific cell types, but can also be triggered as a response to various biotic and abiotic stresses in cells that would not otherwise be lignifying.Cell wall lignification exhibits specific characteristics depending on the cell type being considered. These characteristics include the timing of lignification during cell differentiation, the palette of associated enzymes and substrates, the sub-cellular deposition sites, the monomeric composition and the cellular autonomy for lignin monomer production. This review provides an overview of the current understanding of lignin biosynthesis and polymerization at the cell biology level.The lignification process ranges from full autonomy to complete co-operation depending on the cell type. The different roles of lignin for the function of each specific plant cell type are clearly illustrated by the multiple phenotypic defects exhibited by knock-out mutants in lignin synthesis, which may explain why no general mechanism for lignification has yet been defined. The range of phenotypic effects observed include altered xylem sap transport, loss of mechanical support, reduced seed protection and dispersion, and/or increased pest and disease susceptibility.
Ectopic overexpression of WsSGTL1, a sterol glucosyltransferase gene in Withania somnifera, promotes growth, enhances glycowithanolide and provides tolerance to abiotic and biotic stresses
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Overexpression of WsSGTL1 gene of withania somnifera enhances salt tolerance, heat tolerance and cold acclimation ability in transgenic Arabidopsis plants
,Background Sterol glycosyltrnasferases (SGT) are enzymes that glycosylate sterols which play important role in plant adaptation to stress and are medicinally important in plants like Withania somnifera. The present study aims to find the role of WsSGTL1 which is a sterol glycosyltransferase from W. somnifera, in plant adaptation to abiotic stress. Methodology The WsSGTL1 gene was transformed in Arabidopsis thaliana through Agrobacterium mediated transformation, using the binary vector pBI121, by floral dip method. The phenotypic and physiological parameters like germination, root length, shoot weight, relative electrolyte conductivity, MDA content, SOD levels, relative electrolyte leakage and chlorophyll measurements were compared between transgenic and wild type Arabidopsis plants under different abiotic stresses - salt, heat and cold. Biochemical analysis was done by HPLC-TLC and radiolabelled enzyme assay. The promoter of the WsSGTL1 gene was cloned by using Genome Walker kit (Clontech, USA) and the 3D structures were predicted by using Discovery Studio Ver. 2.5. Results The WsSGTL1 transgenic plants were confirmed to be single copy by Southern and homozygous by segregation analysis. As compared to WT, the transgenic plants showed better germination, salt tolerance, heat and cold tolerance. The level of the transgene WsSGTL1 was elevated in heat, cold and salt stress along with other marker genes such as HSP70, HSP90, RD29, SOS3 and LEA4-5. Biochemical analysis showed the formation of sterol glycosides and increase in enzyme activity. When the promoter of WsSGTL1 gene was cloned from W. somnifera and sequenced, it contained stress responsive elements. Bioinformatics analysis of the 3D structure of the WsSGTL1 protein showed functional similarity with sterol glycosyltransferase AtSGT of A. thaliana. Conclusions Transformation of WsSGTL1 gene in A. thaliana conferred abiotic stress tolerance. The promoter of the gene in W.somnifera was found to have stress responsive elements. The 3D structure showed functional similarity with sterol glycosyltransferases.
The Arabidopsis UDP-glycosyltransferases UGT79B2 and UGT79B3, contribute to cold, salt and drought stress tolerance via modulating anthocyanin accumulation
,Abstract The plant family 1 UDP-glycosyltransferases (UGTs) are the biggest GT family in plants, which are responsible for transferring sugar moieties onto a variety of small molecules, and control many metabolic processes; however, their physiological significance in planta is largely unknown. Here, we revealed that two Arabidopsis glycosyltransferase genes, UGT79B2 and UGT79B3, could be strongly induced by various abiotic stresses, including cold, salt and drought stresses. Overexpression of UGT79B2/B3 significantly enhanced plant tolerance to low temperatures as well as drought and salt stresses, whereas the ugt79b2/b3 double mutants generated by RNAi (RNA interference) and CRISPR-Cas9 strategies were more susceptible to adverse conditions. Interestingly, the expression of UGT79B2 and UGT79B3 is directly controlled by CBF1 (CRT/DRE-binding factor 1, also named DREB1B) in response to low temperatures. Furthermore, we identified the enzyme activities of UGT79B2/B3 in adding UDP-rhamnose to cyanidin and cyanidin 3-O-glucoside. Ectopic expression of UGT79B2/B3 significantly increased the anthocyanin accumulation, and enhanced the antioxidant activity in coping with abiotic stresses, whereas the ugt79b2/b3 double mutants showed reduced anthocyanin levels. When overexpressing UGT79B2/B3 in tt18 (transparent testa 18), a mutant that cannot synthesize anthocyanins, both genes fail to improve plant adaptation to stress. Taken together, we demonstrate that UGT79B2 and UGT79B3, identified as anthocyanin rhamnosyltransferases, are regulated by CBF1 and confer abiotic stress tolerance via modulating anthocyanin accumulation.
beta-glucosidases as detonators of plant chemical defense
,Some plant secondary metabolites are classified as phytoanticipins. When plant tissue in which they are present is disrupted, the phytoanticipins are bio-activated by the action of β-glucosidases. These binary systems – two sets of components that when separated are relatively inert – provide plants with an immediate chemical defense against protruding herbivores and pathogens. This review provides an update on our knowledge of the β-glucosidases involved in activation of the four major classes of phytoanticipins: cyanogenic glucosides, benzoxazinoid glucosides, avenacosides and glucosinolates. New aspects of the role of specific proteins that either control oligomerization of the β-glucosidases or modulate their product specificity are discussed in an evolutionary perspective.
Udp-glycosyltransferases of plant hormones
,UDP-glycosyltransferases (GTases, UGT) catalyze the transfer of the sugar moiety from the uridine-diphosphate-activated monosaccharide (e.g. uridine-diphosphate-5-glucose, UDPG) molecule to the specific acceptor. Glycosides contain aglycons attached by a -glycosidic bond to C1 of the saccharide moiety. Glycosylation is one of the mechanisms maintaining cellular homeostasis through the regulation of the level, biological activity, and subcellular distribution of the glycosylated compounds. The glycosides play various functions in plant cells, such as high-energy donors, or signalling molecules, and are involved in biosynthesis of cell walls. Plant cells exhibit structural and functional diversity of UGT proteins. The Arabidopsis thaliana genome contains more than 100 genes encoding GTases, which belong to 91 families, and are deposited in the CAZY (Carbohydrate Active enzyme) database (www. cazy.org/GlycosylTransferases.html). The largest UGT1 class is divided into 14 subfamilies (A-N), and includes proteins containing highly conserved 44-amino acid PSPG (Plant Secondary Product Glycosyltransferase) motif at the C-terminus. The PSPG motif is involved in the binding of UDP-sugar donors to the enzyme. UGT1 catalyze the biosynthesis of both ester-type and ether-type conjugates of plant hormones (phytohormones). Conjugation of the phytohormones is an important mechanism that regulates the concentration of physiological active hormone levels during growth and development of plants. Glycoconjugation of phytohormones is widespread in the plant kingdom and all known phytohormones are able to form these conjugates. Most plant hormone conjugates do not indicate physiological activity, but rather are involved in transport, storage and degradation of the phytohormones. UDPG-dependent glycosyltransferases possess high substrate specificity, even within a given class of phytohormones. In many cases, the phenotype of plants is strongly affected by loss-of-function mutations in UGT genes. In this paper, advances in the isolation and characterization of glycosyltransferases of all plant hormones: auxin, brassinosteroids, cytokinin, gibberellin, abscisic acid, jasmonates, and salicylate is described
UGT74D1 Is a novel auxin glycosyltransferase from Arabidopsis thaliana
,Auxin is one type of phytohormones that plays important roles in nearly all aspects of plant growth and developmental processes. The glycosylation of auxins is considered to be an essential mechanism to control the level of active auxins. Thus, the identification of auxin glycosyltransferases is of great significance for further understanding the auxin regulation. In this study, we biochemically screened the group L of Arabidopsis thaliana glycosyltransferase superfamily for enzymatic activity toward auxins. UGT74D1 was identified to be a novel auxin glycosyltransferase. Through HPLC and LC-MS analysis of reaction products in vitro by testing eight substrates including auxins and other compounds, we found that UGT74D1 had a strong glucosylating activity toward indole-3-butyric acid [IBA], indole-3-propionic acid [IPA], indole-3-acetic acid [IAA] and naphthaleneacetic acid [NAA], catalyzing them to form corresponding glucose esters. Biochemical characterization showed that this enzyme had a maximum activity in HEPES buffer at pH 6.0 and 37 C. In addition, the enzymatic activity analysis of crude protein and the IBA metabolite analysis from transgenic Arabidopsis plants overexpressing UGT74D1 gene were also carried out. Experimental results indicated that over-production of the UGT74D1 in plants indeed led to increased level of the glucose conjugate of IBA. Moreover, UGT74D1 overexpression lines displayed curling leaf phenotype, suggesting a physiological role of UGT74D1 in affecting the activity of auxins. Our current data provide a new target gene for further genetic studies to understand the auxin regulation by glycosylation in plants.
Glucosylation of 4-hydroxy-2,5-dimethyl-3(2H)-furanone, the key strawberry flavor compound in strawberry fruit
,Abstract Strawberries emit hundreds of different volatiles, but only a dozen, including the key compound HDMF [4-hydroxy-2,5-dimethyl-3(2H)-furanone] contribute to the flavor of the fruit. However, during ripening, a considerable amount of HDMF is metabolized to the flavorless HDMF -d-glucoside. Here, we functionally characterize nine ripening-related UGTs (UDP-glucosyltransferases) in Fragaria that function in the glucosylation of volatile metabolites by comprehensive biochemical analyses. Some UGTs showed a rather broad substrate tolerance and glucosylated a range of aroma compounds in vitro, whereas others had a more limited substrate spectrum. The allelic UGT71K3a and b proteins and to a lesser extent UGT73B24, UGT71W2, and UGT73B23 catalyzed the glucosylation of HDMF and its structural homolog 2(or 5)-ethyl-4-hydroxy-5(or 2)-methyl-3(2H)-furanone. Site-directed mutagenesis to introduce single K458R, D445E, D343E, and V383A mutations and a double G433A/I434V mutation led to enhanced HDMF glucosylation activity compared to the wild-type enzymes. In contrast, a single mutation in the center of the plant secondary product glycosyltransferase box (A389V) reduced the enzymatic activity. Down-regulation of UGT71K3 transcript expression in strawberry receptacles led to a significant reduction in the level of HDMF-glucoside and a smaller decline in HDMF-glucoside-malonate compared with the level in control fruits. These results provide the foundation for improvement of strawberry flavor and the biotechnological production of HDMF-glucoside.
New insights into the regulation of anthocyanin biosynthesis in fruits
,Anthocyanins are important health-promoting pigments that make a major contribution to the quality of fruits. The biosynthetic pathway leading to anthocyanins is well known and the key regulatory genes controlling the pathway have been isolated in many species. Recently, a considerable amount of new information has been gathered on the developmental and environmental regulation of anthocyanin biosynthesis in fruits, specifically the impact of regulation through light. New discoveries have begun to reveal links between the developmental regulatory network and the specific regulators of anthocyanin biosynthesis during fruit ripening. In this opinion article, a simplified model for the different regulatory networks involved with anthocyanin production in fruit is proposed.
Application of glycoscience to the early detection of pancreatic cancer
,Summary The prognosis of pancreatic cancer is extremely poor compared to that of other cancers. One of the reasons for this is the difficulty of early diagnosis. Surveillance using cancer biomarkers and image diagnosis can enable early detection and has improved the prognosis of hepatocellular carcinoma in Japan. However, it is very difficult to detect pancreatic cancer at an early stage using cancer biomarkers and image diagnosis alone. Fucosylation is one of the most important types of glycosylation involved in cancer and inflammation. We have developed a novel glyco-cancer biomarker, fucosylated haptoglobin (Fuc-Hpt), and have investigated its usefulness for the diagnosis of pancreatic cancer over approximately 10 years. Recently, we also found that most pancreatic tissues surrounding pancreatic cancer exhibit chronic pancreatitis with fibrosis and/or fatty degeneration. Certain forms of chronic pancreatitis might indicate high risk for the development of pancreatic cancer. In this review, we provide a historical summary of our research on Fuc-Hpt as a cancer biomarker, and discuss a potential early detection system for pancreatic cancer. This article is protected by copyright. All rights reserved.
Carbohydrate scaffolds as glycosyltransferase inhibitors with in vivo antibacterial activity
,The rapid rise of multi-drug-resistant bacteria is a global healthcare crisis, and new antibiotics are urgently required, especially those with modes of action that have low-resistance potential. One promising lead is the liposaccharide antibiotic moenomycin that inhibits bacterial glycosyltransferases, which are essential for peptidoglycan polymerization, while displaying a low rate of resistance. Unfortunately, the lipophilicity of moenomycin leads to unfavourable pharmacokinetic properties that render it unsuitable for systemic administration. In this study, we show that using moenomycin and other glycosyltransferase inhibitors as templates, we were able to synthesize compound libraries based on novel pyranose scaffold chemistry, with moenomycin-like activity, but with improved drug-like properties. The novel compounds exhibit in vitro inhibition comparable to moenomycin, with low toxicity and good efficacy in several in vivo models of infection. This approach based on non-planar carbohydrate scaffolds provides a new opportunity to develop new antibiotics with low propensity for resistance induction. The inhibition of bacterial glycosyltransferase has the potential to be an effective therapeutic target against drug resistance bacteria. Here, the authors present a novel class of inhibitor compounds based on a monosaccharide scaffold, which are able to eliminate bacterial infections in mice.
Can next-generation antibodies offset biosimilar competition
,Abstract With the first biosimilar version of a monoclonal antibody now under regulatory review in the European Union, which R&D strategies are innovators relying on to counteract competition?
糖基化修饰对IgG/IgY结构和功能特性的影响
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The effects of glycosylation on the structure and functional properties of IgG/IgY
IgG糖基化与疾病相关性研究进展
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The glycosylation of immunoglobulin G and its alterations in diseases
Glycosylation and activities of natural products. Mini-Reviews in
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酶分子稳定性改造研究进展
,酶催化转化在食品、医药和精细化工等领域起着越来越重要的作用。然而,目前大多数酶反应需要在较温和的条件下进行以维持其正常活性,而在实际应用的逆境中(如高热、高酸、高盐等),酶的耐受性却较差、容易失活从而导致反应效率下降,极大地限制了其推广和应用。因此,对酶分子进行抗逆改造以提高其稳定性和催化活性,是当前研究的热点也是难点。本文从化学修饰和分子改造两个方面总结了酶分子稳定性改造的新进展,从定向进化、半理性设计、理性设计和糖基化修饰4个角度重点阐述了分子改造提高酶稳定性的方法,重点介绍了糖基化作为一种新的酶分子稳定性改造技术的思路。
Advances in enzyme stability modification
酶催化转化在食品、医药和精细化工等领域起着越来越重要的作用。然而,目前大多数酶反应需要在较温和的条件下进行以维持其正常活性,而在实际应用的逆境中(如高热、高酸、高盐等),酶的耐受性却较差、容易失活从而导致反应效率下降,极大地限制了其推广和应用。因此,对酶分子进行抗逆改造以提高其稳定性和催化活性,是当前研究的热点也是难点。本文从化学修饰和分子改造两个方面总结了酶分子稳定性改造的新进展,从定向进化、半理性设计、理性设计和糖基化修饰4个角度重点阐述了分子改造提高酶稳定性的方法,重点介绍了糖基化作为一种新的酶分子稳定性改造技术的思路。
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