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中国生物工程杂志

China Biotechnology
China Biotechnology  2013, Vol. 33 Issue (9): 53-58    DOI:
    
An Efficient Fungal Protein Extraction Method
HU Bin-bin, LIN Lian-bing, WEI Yun-lin, JI Xiu-ling, ZHANG Qi
School of Life Science and Technology, Kunming University of Science and Technology, Kunming 650224, China
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Abstract  Protein extraction is the first step of proteomics research. Its quality directly affects the protein expression analysis studies and the accuracy of the results. In order to extract total cellular protein from Mortierella isabellina strain M6-22 for further proteomics and some other related research, five protein extraction methods were tried. Protein concentration and SDS-PAGE analysis of protein abundancy were used to evaluate the effects of these methods, and one of them was selected and modified, by which, a total protein concentration of 2.99 mg/ml was obtained. The modified method had advantage of simpler procedure than the original one and could obtain higher protein abundancy. The modified method was further used to extract the total protein of five other fungi, and the results showed that similar extraction effect could be obtained, indicating that this method can be potentially used as an efficient total protein extraction method for fungi.

Key wordsTotal fungal protein      Mortierella isabellina M6-22      SDS-PAGE     
Received: 19 July 2013      Published: 25 September 2013
ZTFLH:  Q936  
Cite this article:

HU Bin-bin, LIN Lian-bing, WEI Yun-lin, JI Xiu-ling, ZHANG Qi. An Efficient Fungal Protein Extraction Method. China Biotechnology, 2013, 33(9): 53-58.

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https://manu60.magtech.com.cn/biotech/     OR     https://manu60.magtech.com.cn/biotech/Y2013/V33/I9/53

[1] 郭春燕,詹克慧.蛋白质组学技术研究进展及应用.云南农业大学学报,2010,25(4):583-591. Guo C Y, Zhan K H. Research progress and application in technology of proteome. Journal of Yunnan Agricultural University, 2010,25(4):583-591.
[2] Gevaert K, Vandekerckhove J. Protein identification methods in proteomics. Electrophoresis, 2000, 21(6):1145-1154.
[3] 王爽,姜兰香,张宇,等.真菌胞内蛋白质提取方法的建立.吉林大学学报(医学版),2012,38(3):590-594. Wang SH, Jiang L X, Zhang Y, et al. Establishment of intracellular protein extraction methods from fungus. Journal of Jilin University(Medicine Edition),2012,38(3):590-594.
[4] Li M C, Li H, Wei D S, et al. Cloning and molecular characterization of delta12-fatty acid desaturase gene from Mortierella isabellina. World J Gastroenterol,2006,12(21):3373-3379.
[5] 李明春,刘莉,胡国武,等.深黄被孢霉Δ6-脂肪酸脱氢酶基因在转基因烟草中的表达.生物工程学报,2003, 19(2):178-184. Li M C, Liu L, Hu G W, et al. Expression of Mortierella Isabella Δ6-fatty acid desaturase gene in γ-linolenic acid production in Transgenic Tobacco. Chinese Journal of Biotechnology,2003, 19(2):178-184.
[6] 于长青,杨健,姚笛,等.深黄被孢霉Δ5-脱饱和酶基因在花生四烯酸合成中的作用.微生物学报, 2010, 50(6):768-773. Yu C Q, Yang J, Yao D, et al. Effect of Mortierlla isabellina Δ5-desaturases gene on arachidonic acid synthesis. Acta microbiologica Sinica, 2010, 50(6):768-773.
[7] 沈萍,范秀荣,李广武.微生物学实验.第三版.北京:高等教育出版社,1999.215. Shen P, Fan X R, Li G W. Microbiology Experiment.Beijing: Higher Education Press,1999.215.
[8] 焦立新,张云峰,贺丹,等.一种念珠菌蛋白质的提取方法.中国组织工程研究与临床康复,2007,11(8):1540-1541. Jiao L X, Zhang Y F, He D, et al. A methodto extract protein of Candida. Journal of Clinical Rehabilitative Tissue Engineering Research,2007,11(8):1540-1541.
[9] 李毅,郭学军,杨涛,等.放线共生放线杆菌菌毛重组蛋白的提取及纯化.吉林大学学报(医学版),2011,37(2):370-274. Li Y, Guo X J, Yang T, et al. Extraction and purification of recombinant protein LTB-FAB of fimbria of Actinobacillus actinomycetemcomitans. Journal of Jilin University(Medicine Edition), 2011,37(2):370-274.
[10] 刘红,刘艳,谢丽萍,等.顶头孢霉蛋白质组的制备.中国医药工业杂志,2011,42(6):412-415. Liu H, Liu Y, Xie Y P, et al. Proteome preparation for Acremonium chrysogenum. Chinese Journal of Pharmaceuticals,2011,42(6):412-415.
[11] 黄碧芳,朱鸿萍,李彩斌,等.虎奶菇菌丝体自溶蛋白质制备方法比较.中国食用菌,2010,29(1):52-54. Huang B F, Zhu H P, Li C B, et al. Comparision of the preparation Methods for the autolytic proteins of pleurotus tuber-regium (FR.) Sing. Mycelium. Edible Fungi of China, 2010,29(1):52-54.
[12] Kniemeyer O, Lessing F, Scheibner O, et al. Optimisation of a 2-D gel electrophoresis protocol for the humanpathogenic fungus Aspergillus fumigates. Curr Genet, 2006, 49(3):178-189.
[13] Carbery S, Neville CM, Kavanagh KA, et al. Analysis of major intracellular proteins of Aspergillus fumigates by MALDI mass spectrometry: Identification and characterization of an elongation factor 1B protein with glutathione transferase activity. Biochem Biophys Res Commun, 2006,341(4):1096-1109.
[14] Gealt M A, Sheir-Neiss G, Morris N R. The isolation of nuclei from the filamentous fungus aspergillus nidulans. Journal of General Microbiology, 1976, 94:204-210.
[15] Matt P, Fu Z, Fu Q, et al. Biomarker discovery:proteome fractionation and separation in biological samples. Physiol Genomics, 2008, 33(1) :12-17.
[16] Rabilloud T. Use of thiourea to increase the solubility of membrane proteins in two-dimensionalelectrophoresis.Electrophoresis,1998,19(5):758-760.
[17] Encheva V, Gharbia S E, Wait R, et al. Comparison of extraction procedures for proteome analysis of streptococcus pneumonia and a basic reference map. Proteomics, 2006, 6(11):3306-3317.
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