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中国生物工程杂志

China Biotechnology
China Biotechnology  2013, Vol. 33 Issue (4): 121-128    DOI:
    
Expression of XRN1 Protein and Optimization of Fermentation Medium with Response Surface Method
WU Ying-chun, MA Qin-qin, DING Xian-feng, ZHANG Kai, LIU Li-li, GUO Jiang-feng
College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China
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Abstract  Response surface method (RSM) was used to optimize the fermentation medium of XRN1 protein expression. The Plackett-Burman design was used to evaluate the effects of eight factors, including yeast extract, calcium sulfate, MgSO4?7H2O, glycerol, potassium sulfate, phosphoric acid, ammonium sulfate and potassium hydroxide. The statistical analysis revealed that the key factors influencing XRN1 protein expression were yeast extract, magnesium sulfate and potassium sulfate. The path of steepest ascent was used to define optimal response region for these three factors, then the optimal level combinations of factors were obtained through Box-Behnken design, the optimal conditions were as follows: yeast extract 0.45%, magnesium sulfate 0.38%, and potassium sulfate 1.4%. Under optimal conditions, biomass of yeast could increase by 0.5 fold and expression of XRN1 protein could increase by 40%.

Key wordsXRN1 protein      Base salt medium      Response surface method     
Received: 12 October 2012      Published: 25 April 2013
ZTFLH:  Q819  
Cite this article:

WU Ying-chun, MA Qin-qin, DING Xian-feng, ZHANG Kai, LIU Li-li, GUO Jiang-feng. Expression of XRN1 Protein and Optimization of Fermentation Medium with Response Surface Method. China Biotechnology, 2013, 33(4): 121-128.

URL:

https://manu60.magtech.com.cn/biotech/     OR     https://manu60.magtech.com.cn/biotech/Y2013/V33/I4/121

[1] Chang J H,Xiang S,Xiang K,et al. Structural and biochemical studies of the 5'→3' exoribonuclease Xrn1. Nature Structural & Molecular Biology,2011,18:270-278.
[2] Interthal H,Bellocq C,Bähler J,et al. A role of Sep1 (=Kem1, Xrn1) as a microtubule-associated protein in Saccharomyces cerevisiae. The Embo Journal,1995,14(6):1057-1066.
[3] 曹小红, 蔡萍,李凡,等. 利用响应面法优化 Bacillus natto TK-1 产脂肽发酵培养基. 中国生物工程杂志,2007,27:59-65. Cao X H,Cai P,Li F,et al. Medium optimization for lipopeptide produced by Bacillus natto TK-1using response surface methodology. China Biotechnology,2007,27:59-65.
[4] 孔静静,王长城,杨海麟,等. 产HSA-CP融合蛋白毕赤酵母的发酵条件优化. 生物加工过程,2009,7:25-28. Kong J J,Wang C C,Yang H L,et al. Fermentation conditions of optimization of HSA-CP fusion protein expressed in Pichia pastori. Chinese Journal of Bioprocess Engineering,2009,7:25-28.
[5] 严慧玲,蓝东明,王永华,等. 响应面法优化CALA在毕赤酵母中的组成型表达. 现代食品科技,2011,27:972-976. Yan H L,Lan D M,Wang Y H,et al. Optimization of the fermentation conditions of Candida antarctica Lipase A in Pichia pastoris using response surface methodology. Modern Food Science and Technology,2011,27:972-976.
[6] Kenna M,Stevens A,Mccammon M,et al. An essential yeast gene with homology to the exonuclease encoding XRN1/KEM1 gene also encodes a protein with exoribonuclease activity. Molecular and Cellular Biology,1993,13:341-350.
[7] 张智,朱宏亮,钮宏禹,等. 响应面法优化枯草芽孢杆菌产蛋白酶的发酵条件. 食品科学,2008,29:400-404. Zhang Z,Zhu H L,Niu H Y,et al. Optimization of fermentation production conditions of protease by Bacillus subtilis with response surface methodology. Food Science,2008,29:400-404.
[8] 汪彬彬,车振明. Plackett-Burman 和 Box-Benhnken Design 实验设计法优化华根霉产糖化酶发酵培养基的研究. 食品科技,2011,36:41-45. Wang B B,Che Z M. Optimization of Rhizopus fermentation medium for glucoamylase production by Plackett-Burman and Box-Benhnken design. Food Science and Technology,2011,36:41-45.
[9] 陈琳,孟祥晨. 响应面法优化植物乳杆菌代谢产细菌素的发酵条件. 食品科学,2011,32:176-180. Cheng L,Meng X C. Optimization of fermentation conditions of Lactobacillus plantarum for bacteriocin production by response surface methodology. Food Science,2011,32:176-180.
[10] Puranik V,Mishra V,Fatima S,et al. Development and optimization of protein rich germinated bengal gram pickle using Response Surface Methodology. Journal of Food Science and Engineering,2011,1:191-200.
[11] 陆文渊,成浩,王丽鸳,等. 响应面法优化茶氨酸生物合成基因工程菌发酵条件的研究. 食品科学,2008,29:243-247. Lu W Y,Cheng H,Wang L Y,et al. Response surface methodology for optimization of fermentation conditions of genetically engineered Escherichia coli Strain for biosynthesis of theanine. Food Science,2008,29:243-247.
[12] Renne R,Covarrubias S,Gaglia M,et al. Coordinated destruction of cellular messages in translation complexes by the gammaherpesvirus host shutoff factor and the mammalian exonuclease Xrn1. PLoS Pathogens,2011,7:1-15.
[13] 刘寅,张永光,,张汝兵,等. 响应面法优化产酸丙酸杆菌丙酸发酵条件的研究. 食品工业科技,2010,31:167-170. Liu Y,Zhang Y G,Zhang R B,et al. Optimization of fermentation conditions for the production of propionic acid by propioni bacterium Acidi propionici using response surface methodology. Science and Technology of Food Industry,2010,31:167-170.
[14] Bashkirov V I,Solinger J A,Heyer W D,et al. Identification of functional domains in the Sep1 protein (= Kem1, Xrn1),which is required for transition through meiotic prophase in Saccharomyces cerevisiae. Chromosoma,1995,104:215-222.
[15] 赵沁沁,刘军,徐爱才,等. 响应面法优化酿酒酵母工程菌产甜蛋白 monellin 发酵培养基. 中国酿造,2011,9:50-55. Zhao Q Q,Liu J,Xu A C,et al. Optimization of fermentation medium of sweet protein monellin produced by engineering strain of Saccharomyces cerevisiae using response surface methodology. China Brewing,2011,9:50-55.
[16] Wei S,Cheng X,Huang L,et al. Medium optimization for acarbose production by Actinoplanes sp.A56 using the response surface methodology. African Journal of Biotechnology,,2012,,9 (13):1949-1954.
[17] Zhang Y,Li Q,,Wang D,et al. Optimization of succinic acid fermentation with Actinobacillus succinogenes by response surface methodology (RSM). Journal of Zhejiang University-Science B,,2012,,13 (2):103-110.
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