| [1] Vaucheret H. Plant ARGONAUTES. Trends Plant Sci, 2008, 13:350-358.
[2] Mallory A C, Bouche N. MicroRNA-directed regulation: to cleave or not to cleave. Trends Plant Sci, 2008,13:359-367.
[3] Grosshans H, Filipowicz W. Proteomics joins the search for microRNA targets. Cell, 2008, 134:560-562.
[4] Jung J H, Seo P J, Park C M. MicroRNA biogenesis and function in higher plants. Plant Biotechnol Rep, 2009, 3:111-126.
[5] Willmann M R, Poethig R S. Conservation and evolution of miRNA regulatory programs in plant development. Curr Opin Plant Biol, 2007, 10:503-511.
[6] Terzi L C, Simpson G G. Regulation of flowering time by RNA processing. Curr Top Microbiol Immunol, 2008, 326:201-218.
[7] Gregory B D, O’Malley R C, Lister R,et al.A link between RNA metabolism and silencing affecting Arabidopsis development. Dev Cell, 2008, 14:854-866.
[8] Takwi A, Li Y. The p53 pathway encounters the microRNA world. Curr Genomics, 2009, 10:194-197.
[9] Nelson P T, Wang W X, Rajeev B W. MicroRNAs (miRNAs) in neurodegenerative diseases. Brain Pathol, 2008, 18:130-138.
[10] Sunkar R, Chinnusamy V, Zhu J H, et al. Small RNAs as big players in plant abiotic stress responses and nutrient deprivation. Trends Plant Sci, 2007, 12:301-309.
[11] Wheeler B M, Heimberg A M, Moy V N, et al. The deep evolution of metazoan microRNAs. Evol Dev, 2009, 11:50-68.
[12] Sunkar R, Jagadeeswaran G. In silico identification of conserved microRNAs in large number of diverse plant species. BMC Plant Biol, 2008, 8:37-42.
[13] Reinhart B J, Slack F J, Basson M, et al. The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans. Nature, 2000, 403: 901-906.
[14] Kapsimali M, Kloosterman W P, de Bruijn E et al. MicroRNAs show a wide diversity of expression profiles in the developing and mature central nervous system. Genome Biol, 2007, 8: R173.
[15] Sood P, Krek A, Zavolan M, et al. Cell-type-specific signatures of microRNAs on target mRNA expression. Proc Natl Acad Sci USA, 2006, 103: 2746-2751.
[16] Lagos Q M, Rauhut R, Meyer J, et al. New microRNAs from mouse and human. RNA, 2003, 9:l75-l79.
[17] Sempere L F, Freemantle S, Pitha-Rowe I et al. Expression profiling of mammalian microRNAs uncovers a subset of brain-expressed microRNAs with possible roles in murine and human neuronal differentiation. Genome Biol, 2004, 5:Rl3.
[18] Castoldi M, Schmidt S, Benes V, et al. A sensitive array for microRNA expression profiling (miChip) based on locked nucleic acids (LNA). RNA, 2006, 12:913-920.
[19] Nelson P T, Baldwin D A, Scearee L M. Microarry based highthrough put gene expression profiling of microRNAs. Nat Methods, 2004, 1:l55-l61.
[20] Chen C F, Ridzon D A, Broomer A J, et al. Real-time quantification of microRNAs by stem-loop RT-PCR.Nucleic Acids Res, 2005, 33(20): e179.
[21] Yang H P, Schmuke J J, Flagg L M, et al. A novel real-time polymerase chain reaction method for high throughput quantification of small regulatory RNAs. Plant Biotech,2009,7:621-630.
[22] Duncan D D, Eshoo M, Esau C,et al. Absolute quantitation of microRNAs with a PCR-based assay. Anal Biochem, 2006, 359:268-270.
[23] Shi R, Chiang V L. Facile means for quantifying microRNA expression by real-time PCR. Biotechniques, 2005, 39:519-525.
[24] Christopher K R, Brians R, Philip G E, et al. Simple, quantitative primer-extension PCR assay for direct monitoring of microRNAs and short-interfering RNAs. RNA, 2005, 11:1737-1744.
[25] Wang X W. A PCR-based platform for microRNA expression profiling studies. RNA, 2009, 15: 716-723.
[26] Sharbati-Tehrani S, Kutz-Lohroff B, Bergbauer R, et al. miR-Q: a novel quantitative RT-PCR approach for the expression profiling of small RNA molecules such as miRNAs in a complex sample. BMC Mol Biol, 2008, 9:34.
[27] Zeng C Y, Wang W Q, Zheng Y, et al. Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants. Nucleic Acids Res, 2009, 38(3):981-995.
[28] Allawi H T, Dahlberg J E, Olson S, et al. Quantitation of microRNAs using a modified Invader assay. RNA, 2004, 10(7): 1153-1161.
[29] Jiang M, Arzumanov A A, Gait MJ, et al. A bi-functional siRNA construct induces RNA interference and also primes PCR amplification for its own quantification. Nucleic Acids Res, 2005, 33:e151.
[30] Liu W L, Stevenson M, Seymour L W, et al. Quantification of siRNA using competitive qPCR. Nucleic Acids Res, 2009, 37(1):1 e4.
[31] Morozova O, Marra M A. Applications of next-generation sequencing technologies in functional genomics. Genomics, 2008, 92(5): 255-264. |
