|
|
|
| Research Progress of sRNA Regulates the Expression of Genes in Related with Bacterial Resistance |
Zhong-yang YE1,Huai-yu QIU3,Bing-hua ZHU1,Ze LI1,Ye ZHU2,**( ),Li-gui WANG1,**() |
1 Institute of Disease Control and Prevention of Chinese People’s Liberation Army, Beijing 100071,China;
2 Library ofAcademy of Military Sciences, Beijing 100850, China
3 Beijing Chao-Yang Hospital, Capital Medical University, Beijing 100020,China |
|
|
|
Abstract In recent years, the emergence of drug-resistant bacteria poses a serious threat to the antibiotic therapy. sRNAs are new regulatory factors of gene expression, which regulate the physiological function of cell in response to various environmental changes by pairing target mRNA or protein. Studies have shown that sRNA can play an important role in the process of bacterial resistance, such as blocking the pathways of antibiotics into cells and releasing the drugs in the cells. The sRNAs regulates the expression of genes in related with bacterial resistance, which is helpful for elucidation of resistance mechanisms and discovery of new drug targets were reviewed.
|
|
Received: 27 February 2018
Published: 13 August 2018
|
|
|
|
Corresponding Authors:
Ye ZHU,Li-gui WANG
E-mail: zhuye10079@sina.com;wangligui1983@126.com
|
|
|
| [1] |
Ding Y T . The research progress on mechanism of bacterial resistance at home and aboad. Modern Preventive Medicine, 2013,40(6):1109-1111.
|
|
|
| [2] |
Zhao M Q, Shen H Y, Pan W , et al. The causes, mechanism and preventive measures of bacterial resistance. China Animal Husbandry & Veterinary Medicine, 2011,38(5):177-181.
|
|
|
| [3] |
Hou F, Lü Y . Bacterial resistance can’t be ignored. Chinese Journal of Antibiotics, 2017,42(3):203-206.
|
|
|
| [4] |
Nie J J, Jin X, Meng X C , et al. Classifications and funtions of small non-coding RNA in bacteria. Chinese Journal of Animal Infectious Diseases, 2013,21(3):75-79.
|
|
|
| [5] |
Song T, Sabharwal D, Gurung J M , et al. Vibrio cholerae utilizesdirect sRNA regulation in expression of a biofilm matrix protein. PLoS One, 2014,9(7):e101280.
doi: 10.1371/journal.pone.0101280
pmid: 4108314
|
|
|
| [6] |
Thomason M K, Fontaine F, De L N , et al. A small RNA thatregulates motility and biofilm formation in response to changes innutrient availability in Escherichia coli. Mol Microbiol, 2012,84(1):17-35.
doi: 10.1111/mmi.2012.84.issue-1
|
|
|
| [7] |
Udekwu K I . Transcriptional and post-transcriptional regulation of the Escherichia coli luxS Mrna; involvement of the sRNA MicA. PLoS One, 2010,5(10):e13449.
doi: 10.1371/journal.pone.0013449
|
|
|
| [8] |
Du D, Veen H W V,Luisi B F .Assembly and operation of bacterial tripartite multidrug efflux pumps. Trends in Microbiol, 2015,23(5):311-319.
doi: 10.1016/j.tim.2015.01.010
pmid: 25728476
|
|
|
| [9] |
Parker A, Gottesman S . Small RNA regulation of TolC, the outer membrane component of bacterial multidrug transporters. Journal of Bacteriology, 2016,198(7):1101-1113.
doi: 10.1128/JB.00971-15
pmid: 26811318
|
|
|
| [10] |
Omar T Q, Vicenta M, Rafael N M , et al. Independent activity of the homologous small regulatory RNAs AbcR1 and AbcR2 in the legume symbiont Sinorhizobium meliloti. PLoS One, 2013,8(7):e68147.
doi: 10.1371/journal.pone.0068147
|
|
|
| [11] |
Nishino K, Yamasaki S, Hayashi-Nishino M , et al. Effect of overexpression of small non-coding DsrA RNA on multidrug efflux in Escherichia coli. Journal of Antimicrobial Chemotherapy, 2011,66(2):291-296.
doi: 10.1093/jac/dkq420
pmid: 21088020
|
|
|
| [12] |
Lydgia A J, Pan J C, Michael W D , et al. Control of RNA stability by NrrF, an iron-regulated small RNA in Neisseria gonorrhoeae. Journal of Bacteriology, 2013,195(22):5166-5173.
doi: 10.1128/JB.00839-13
pmid: 3811587
|
|
|
| [13] |
Anne H D . Outer membrane permeability and antibiotic resistance. Biochim Biophys Acta, 2009,1794(5):808-816.
doi: 10.1016/j.bbapap.2008.11.005
pmid: 19100346
|
|
|
| [14] |
Kyung M, Susan G . A PhoQ/P-regulated small RNA regulates sensitivity of Escherichia coli to antimicrobial peptides. Mol Microbiol, 2009,74(6):1314-1330.
doi: 10.1111/j.1365-2958.2009.06944.x
pmid: 19889087
|
|
|
| [15] |
Acuna L G, Barros M J, Martinez D , et al. A feed-forward loop between SroC and MgrR small RNAs modulates the expression of eptB and the susceptibility to polymyxin B in Salmonella typhimurium. Microbiology, 2016,162(11):1996-2004.
doi: 10.1099/mic.0.000365
|
|
|
| [16] |
Pulvermacher S C, Stauffer L T, Stauffer G V . Role of the sRNA GcvB in regulation of cycA in Escherichia coli. Microbiology, 2009,155(1):106-114
doi: 10.1099/mic.0.023598-0
pmid: 19118351
|
|
|
| [17] |
Zhu Z, Cao M Z, Zhang J L , et al. Research progress on bacterial resistance. China Animal Husbandry&Veterinary Medicine, 2015,42(12):3371-3376.
|
|
|
| [18] |
Jörg V, Kai P . Small non-coding RNAs and the bacterial outer membrane. Microbiology, 2006,9(6):605-611
doi: 10.1016/j.mib.2006.10.006
pmid: 17055775
|
|
|
| [19] |
Monica S G, Taylor B U, Emily B G , et al. MicL, a new sE-dependent sRNA, combatsenvelope stress by repressing synthesisof Lpp, the major outer membranelipoprotein. Genes Dev. 2014,28(14):1620-1634.
doi: 10.1101/gad.243485.114
|
|
|
| [20] |
Hubert S, Marie P C, Justine B L , et al. Antagonistic functions between the RNA chaperone Hfq and an sRNA regulate sensitivity to the antibiotic colicin. The EMBO Journal, 2013,32(20):2764-2778.
doi: 10.1038/emboj.2013.205
|
|
|
| [21] |
Alex E, Pierre T, Svetlana C , et al. A small RNA controls a protein regulator involved in antibiotic resistance in Staphylococcus aureus. Nucleic Acids Research, 2014,42(8):4892-4905.
doi: 10.1093/nar/gku149
|
|
|
| [22] |
Khan M A, Göpel Y, Milewski S , et al. Two small RNAs conserved in Enterobacteriaceae provide intrinsic resistance to antibiotics targeting the cell wall biosynthesis enzyme glucosamine-6-phosphate synthase. Front Microbiol, 2016,7(e1025):908.
|
|
|
| [23] |
Gao X F, Liu Z Z, Li W L , et al. Advance in research on regulation of sRNAs in bacterial biofilm formation. Mil Med Sci, 2017,41(6):530-533.
|
|
|
| [24] |
Jacob R C, Karin S . Small RNAs and their role in biofilm formation. Trends Microbiol, 2013,21(1):39-49.
doi: 10.1016/j.tim.2012.10.008
pmid: 3752386
|
|
|
| [25] |
Miller C L, Manuel R , Rajasekhar K S L,et al.RsmW,Pseudomonas aeruginosa small non-coding RsmA-binding RNA upregulated in biofilm versus planktonic growth conditions. BMC Microbiology, 2016,16(1):155.
doi: 10.1186/s12866-016-0771-y
|
|
|
| [26] |
Li Y L, Lu Y M, Han Z M , et al. Bacterial biofilm: composition, regulation and association with plant. Microbiology China, 2017,44(6):1491-1499.
|
|
|
| [27] |
Maureen K T, Fanette F, Nicholas D L , et al. A small RNA that regulates motility and biofilm formation inresponse to changes in nutrient availability in Escherichia coli. Mol Microbiol. 2012,84(1):17-35.
doi: 10.1111/mmi.2012.84.issue-1
|
|
|
| [28] |
Liu Z Z, Gao X F, Wang H D , et al. Plasmid pPCP1-derived sRNA HmsA promotes biofilm formation of Yersinia pestis. BMC Microbiology, 2016,16(1):176.
doi: 10.1186/s12866-016-0793-5
pmid: 4973556
|
|
|
| [29] |
Diego O S, Franziska M, Anja M R , et al. The green tea polyphenol EGCG inhibits E. coli biofilm formation by impairing amyloid curli fibre assembly and downregulating the biofilm regulator CsgD via the σE-dependent sRNA RybB. Molecular Microbiology, 2016,101(1):136-151.
doi: 10.1111/mmi.13379
|
|
|
| [30] |
Yu J, Schneiders T . Tigecycline challenge triggers sRNA production in Salmonella enterica serovar Typhimurium. BMC Microbiol, 2012,12(1):1-13.
doi: 10.1186/1471-2180-12-1
pmid: 3292460
|
|
|
| [31] |
Howden B P, Beaume M, Harrison P F , et al. Analysis of the small RNA transcriptional response in multidrug-resistant Staphylococcus aureus after antimicrobial exposure. Antimicrob Agents Chemother, 2013,57(8):3864-3874.
doi: 10.1128/AAC.00263-13
|
|
|
| [32] |
Jeeves R E , Marriott A A N,Pullan S T,et al. Mycobacterium tuberculosis is resistant to isoniazid at a slow growth rate by single nucleotide polymorphisms in katG Codon Ser315. PLoS One, 2015,10(9):e0138253.
doi: 10.1371/journal.pone.0138253
|
|
|
| [33] |
Molina-Santiago C, Daddaoua A, Gomez-Lozano M , et al. Differential transcriptional response to antibiotics by Pseudomonas putida DOT-T1E. Environmental Microbiology, 2015,17(9):3251-3262.
doi: 10.1111/emi.2015.17.issue-9
|
|
|
| [34] |
Yao Y F, Zhao Y, Zhao G R . Artificial sRNAs silencing csrA to Optimize the production of L-tyrosine in Escherichia coli. China Biotechnology, 2013,33(8):60-65.
|
|
|
| [35] |
An Z F, Li Y M, Yang Y K , et al. Overexpression of artificial sRNA anti-micA enhancing Escherichia coli viability and pullulanase production. Journal of Biology, 2017,34(1):16-22.
|
|
|
|
Viewed |
|
|
|
Full text
|
|
|
|
|
Abstract
|
|
|
|
|
Cited |
|
|
|
|
| |
Shared |
|
|
|
|
| |
Discussed |
|
|
|
|
