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中国生物工程杂志

China Biotechnology
China Biotechnology  2018, Vol. 38 Issue (6): 17-25    DOI: 10.13523/j.cb.20180603
研究报告     
Study on Functional Properties of Carbon Catabolite Repressor CRE1 in Trichoderma atroviride
Pei-yi LI,Yu-cong ZHOU,Ya-qian LI(),Jie CHEN
School of Agriculture and Biology,Shanghai Jiao Tong University,Key Laboratory of Urban Agriculture (South) Ministry of Agriculture,Shanghai 200240,China
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Abstract  

The genus Trichoderma comprises a large number of strains found in multitude of ecological niches. Some of them have been developed as biocontrol agents against plant diseases, which can antagonize plant pathogens and facilitate the growth of plants at the same time, showing an important value for biocontrol in agriculture. Carbon catabolite repression (CCR) is a wide-domain regulatory circuit, allowing the preferred assimilation of carbon sources of high nutritional value over others. CCR is mediated by the Cys2His2 type transcription factor CreA/CREI which has been cloned from numerous filamentous fungi. The latest studies have found that CRE1, the carbon catabolite repressor, regulates cell growth and metabolic procedures of Trichoderma spp., which would be helpful for strains’ antagonism against various pathogens and their own survival at different habitats.On basis of wide type strain T.atroviride 23, T23 and its cre1 knock out mutant strain T23 Δcre1 kept in laboratory, the phenotypic assays and function analysis of both strains have been carried out on different mediums to draw the following conclusions. Firstly, the cre1 gene in Trichoderma is essential for the growth and sporulation of T.atroviride. When cre1 is knocked out, the growth rate of T23 Δcre1 slows down, and its sporulation apparently lags behind that of T23 with the number of spores reduced an order of magnitude; Furthermore, the response of T23 Δcre1 to carbon sources and nitrogen sources are diffirent from those of T23. The results further indicate cre1-mediated regulation of growth and formation of sporulation depends on specific culture. Secondly, how CRE1 regulates the expression of some cell-wall degraditon enzymes, such as chitnase, β-1,3-glucanase, protease and cellulase, is detected. Results of enzyme activity assay on plate and qRT-PCR show that CRE1 represses the expression of the chitianse and β-1,3-glucanase obviously. In line with that, transcription activity of two enzyme activity encoding genes, chit42 and glucanase, respectively increase by 2 times and 4 times in T23Δcre1 compared with in T23. Enzyme activity comparison of cellulase and protease conducted on plate also indicates a higher activity level in T23Δcre1 rather than in T23. Finally, the regulation of CRE1 on the expression of several non-ribosomal peptides synthases (NRPSs) and polyketide synthases (PKSs), which are found in charge of the synthesis of most valuable secondary metabolies for biocontrol, are deterimined. According to results of qRT-PCR, CRE1 plays a complicate role in the regulation on the transcription of NRPSs and PKSs. Among the three choosen NRPS encoding genes, the knock out of cre1 results in an increase of 8.72-fold expression of NRPS2, while NRPS1 expression is reduced to 1/2 and expression of NRPS3 is not significantly changed. Also, expression of PKS3 coding conidia pigment formation in T23Δcre1 increases by 3 times compared with that in T23,and PKS1 expression is detected being inhibited in T23. Thus, CRE1 indirectly affects the synthesis and secretion of Trichoderma secondary metabolites.In conclusion, carbon catabolite repressor CRE1 regulates mycelia growth, secondary metabolites biosynthesis, which is exactly of great importance in biocontrol procedure of T.atroviride. Those findings are pretty valuable for controlling synthesis and secretion of metabolites of T.atroviride and further to improve its biocontrol effects.



Key wordsTrichoderma atroviride 23      Carbon catabolite repressor CRE1      Growth      Enzyme activity characteristics      Secondary metabolism synthesis genes     
Received: 17 December 2017      Published: 06 July 2018
ZTFLH:  Q291  
Corresponding Authors: Ya-qian LI     E-mail: lauren@sjtu.edu.cn
Cite this article:

Pei-yi LI,Yu-cong ZHOU,Ya-qian LI,Jie CHEN. Study on Functional Properties of Carbon Catabolite Repressor CRE1 in Trichoderma atroviride. China Biotechnology, 2018, 38(6): 17-25.

URL:

https://manu60.magtech.com.cn/biotech/10.13523/j.cb.20180603     OR     https://manu60.magtech.com.cn/biotech/Y2018/V38/I6/17

菌株 特征 来源
T23 上海交通大学木霉菌菌种保藏管理中心
T23Δcre1 T23菌株缺失cre1基因突变株 同上
qRT-PCR引物 序列(5'-3')
NRPS1-F GATGAGACCACGCTTTCC
NRPS1-R TATAGCACCCGGTAAGTCG
NRPS2-F ACAAAATTGCGCGAGACGAAC
NRPS2-R ATTCACTTCAGGCACTCGGAT
NRPS3-F TAGTCTCGCCGCAGAAGCA
NRPS3-R GCAAGTTGTGATGAATAGTGT
PKS1-F AAGACAATCCAACCTATCGGGCCA
PKS1-R TCTGCAACATCACAAGGCACAACG
PKS2-F CGCGCAACTTCAACGCTCTTACAA
PKS2-R TCATAGGCACAAATACCTCCCGCA
Chit42-F TTCCCGCAAGCAAGAT
Chit42-R GTAGTCCCAAATACCGTTC
Glu-F GAGACCAACTACGACCAGG
Glu-R TTTGTTTCCATCGCACC
Table 1 Strains and primers used in this study
Fig.1 Phenotypic comparison between T23Δcre1 and T23 on plate
Fig.2 The phenotypic differences between T23 and T23Δcre1 when cultured on SM medium with diverse carbon sources
Fig.3 The phenotypic differences between T23 and T23Δcre1 when cultured on PN medium with diverse carbon sources
Fig.4 The mycelia growth of T23Δcre1 and T23 on PN and SM medium
Fig.5 Effect of cre1 on chitinase and β-1,3-glucanase activity (a) Chitinase activity assay on plate (b) β-1,3-glucanase activity assay on plate (c) The enzyme activity of chitnase and β-1,3-glucanase after fermentation (d) Expression levels of chitinase and β-1,3-glucanase genes
Fig.6 Effect of cre1 on cellulase and protease activity (a) Enzyme activity of cellulase (b) Enzyme activity of protease
ID gene T23(T.atroviride) Δcre1 (T.atroviride) Folda
CT β-actin CT T23 ΔCT T23 CT β-actin CT Δcre1 ΔCT Δcre1
48813 NRPS1 20.04±0.30 31.24±0.31 11.20 22.33±0.42 34.42±0.30 12.09 0.54
52932 NRPS2 20.04±0.30 32.52±0.74 12.48 22.33±0.42 31.69±0.16 9.36 8.72
39887 NRPS3 20.40±0.40 26.02±1.27 5.98 22.33±0.30 28.15±0.12 5.82 1.12
33092 PKS1 20.04±0.30 29.73±014 9.69 22.33±0.42 31.77±0.01 9.44 1.19
79 PKS3 20.04±0.30 26.46±0.29 6.42 22.33±0.43 27.22±0.24 4.89 2.88
Table 2 Effect of CRE1 on NRPSs and PKSs coding genes transcription
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