计算生物学与生物信息学专辑 |
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利用系统进化树对H7N9大数据预测传播模型的评估 |
杜鹏程1,2, 于伟文1,2, 陈禹保3, 闫鹏程3, 安云鹤4, 陈晨1,2 |
1. 中国疾病预防控制中心传染病预防控制所 传染病预防控制国家重点实验室 北京 102206;
2. 感染性疾病诊治协同创新中心 杭州 310003;
3. 北京市计算中心 北京 100094;
4. 北京市理化分析测试中心 北京 100089 |
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Evaluation of the H7N9 Transmission Model Predicted by Big Data by Phylogenetic Tree |
DU Peng-cheng1,2, YU Wei-wen1,2, CHEN Yu-bao3, YAN Peng-cheng3, AN Yun-he4, CHEN Chen1,2 |
1. State Key Laboratory for Infectious Diseases Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China;
2. Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Hangzhou 310003, China;
3. Beijing Computing Center, Beijing 100094, China;
4. Beijing Centre for Physical & Chemical Analysis, Beijing 100089, China |
引用本文:
杜鹏程, 于伟文, 陈禹保, 闫鹏程, 安云鹤, 陈晨. 利用系统进化树对H7N9大数据预测传播模型的评估[J]. 中国生物工程杂志, 2014, 34(11): 18-23.
DU Peng-cheng, YU Wei-wen, CHEN Yu-bao, YAN Peng-cheng, AN Yun-he, CHEN Chen. Evaluation of the H7N9 Transmission Model Predicted by Big Data by Phylogenetic Tree. China Biotechnology, 2014, 34(11): 18-23.
链接本文:
https://manu60.magtech.com.cn/biotech/CN/10.13523/j.cb.20141103
或
https://manu60.magtech.com.cn/biotech/CN/Y2014/V34/I11/18
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[8] 卢珊, 陈晨, 于伟文, 等. 利用网络爬虫技术分析我国活禽贸易与H7N9禽流感病毒传播的关系. 中华流行病学杂志, 2014, 35(3): 288-230. Lu S, Chen C, Yu W W,et al.Investigating geographical spread of the human infection with avian influenza A(H7N9)virus by online knowledge analysis of the live bird trade with a distributed focused erawler.Chinese Journal of Epidemiology,2014,35(3):228-230.
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[11] Stamatakis A. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 2006, 22(21): 2688-2690.
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