综述 |
|
|
|
|
酵母表面展示体系的构建及在纤维素降解中的应用* |
刘明珠1,张良1,郭芳1,李春1,2,3,冯旭东1,**() |
1 北京理工大学化学与化工学院 化学工程系 生物化工研究所 医药分子科学与制剂工程工业 和信息化部重点实验室 北京 100081 2 清华大学化学工程系 工业生物催化教育部重点实验室 北京 100084 3 清华大学合成与系统生物学研究中心 北京 100084 |
|
Construction of Yeast Surface Display System and Application in Cellulose Degrading |
LIU Ming-zhu1,ZHANG Liang1,GUO Fang1,LI Chun1,2,3,FENG Xu-dong1,**() |
1 Key Laboratory of Medical Molecule Science and Pharmaceutics Engineering, Ministry of Industry and Information Technology, Institute of Biochemical Engineering, Department of Chemical Engineering, School of Chemistry and Chemical Engineering, Beijing Institute of Technology, Beijing 100081, China 2 Key Lab for Industrial Biocatalysis, Ministry of Education, Department of Chemical Engineering, Tsinghua University, Beijing 100084, China 3 Center for Synthetic and Systems Biology, Tsinghua University, Beijing 100084, China |
引用本文:
刘明珠,张良,郭芳,李春,冯旭东. 酵母表面展示体系的构建及在纤维素降解中的应用*[J]. 中国生物工程杂志, 2022, 42(5): 91-99.
LIU Ming-zhu,ZHANG Liang,GUO Fang,LI Chun,FENG Xu-dong. Construction of Yeast Surface Display System and Application in Cellulose Degrading. China Biotechnology, 2022, 42(5): 91-99.
链接本文:
https://manu60.magtech.com.cn/biotech/CN/10.13523/j.cb.2112044
或
https://manu60.magtech.com.cn/biotech/CN/Y2022/V42/I5/91
|
[1] |
Yamada R, Nakatani Y, Ogino C, et al. Efficient direct ethanol production from cellulose by cellulase- and cellodextrin transporter-co-expressing Saccharomyces cerevisiae. AMB Express, 2013, 3: 34.
doi: 10.1186/2191-0855-3-34
|
[2] |
Wachtmeister J, Rother D. Recent advances in whole cell biocatalysis techniques bridging from investigative to industrial scale. Current Opinion in Biotechnology, 2016, 42: 169-177.
doi: S0958-1669(16)30140-9
pmid: 27318259
|
[3] |
Smith M R, Gao H, Prabhu P, et al. Elucidating structure-performance relationships in whole-cell cooperative enzyme catalysis. Nature Catalysis, 2019, 2 (9): 809-819.
doi: 10.1038/s41929-019-0321-8
|
[4] |
Hossain S A, Rahman S R, Ahmed T, et al. An overview of yeast cell wall proteins and their contribution in yeast display system. Asian Journal of Medical and Biological Research, 2020, 5(4): 246-257.
doi: 10.3329/ajmbr.v5i4.45261
|
[5] |
Seo M J, Schmidt Dannert C. Organizing multi-enzyme systems into programmable materials for biocatalysis. Catalysts, 2021, 11(4): 409.
doi: 10.3390/catal11040409
|
[6] |
冯旭东, 李春. 酶的改造及其催化工程应用. 化学进展, 2015, 27(11): 1649-1657.
doi: 10.7536/PC150419
|
|
Feng X D, Li C. The improvement of enzyme properties and its catalytic engineering strategy. Progress in Chemistry, 2015, 27(11): 1649-1657.
doi: 10.7536/PC150419
|
[7] |
Salgaonkar M, Nadar S S, Rathod V K. Combi-metal organic framework (Combi-MOF) of α-amylase and glucoamylase for one pot starch hydrolysis. International Journal of Biological Macromolecules, 2018, 113: 464-475.
doi: S0141-8130(17)34734-7
pmid: 29458106
|
[8] |
Asghar A, Iqbal N, Noor T, et al. Efficient one-pot synthesis of a hexamethylenetetramine-doped Cu-BDC metal-organic framework with enhanced CO2 adsorption. Nanomaterials (Basel, Switzerland), 2019, 9(8): 1063.
|
[9] |
Trobo Maseda L, H Orrego A, Guisan J M, et al. Coimmobilization and colocalization of a glycosyltransferase and a sucrose synthase greatly improves the recycling of UDP-glucose: glycosylation of resveratrol 3-O-β-D-glucoside. International Journal of Biological Macromolecules, 2020, 157: 510-521.
doi: S0141-8130(20)32982-2
pmid: 32344088
|
[10] |
Thygesen A, Oddershede J, Lilholt H, et al. On the determination of crystallinity and cellulose content in plant fibres. Cellulose, 2005, 12(6): 563-576.
doi: 10.1007/s10570-005-9001-8
|
[11] |
Yamada R, Hasunuma T, Kondo A. Endowing non-cellulolytic microorganisms with cellulolytic activity aiming for consolidated bioprocessing. Biotechnology Advances, 2013, 31(6): 754-763.
doi: 10.1016/j.biotechadv.2013.02.007
|
[12] |
Ellis G A, Klein W P, Lasarte-Aragonés G, et al. Artificial multienzyme scaffolds: pursuing in vitro substrate channeling with an overview of current progress. ACS Catalysis, 2019, 9(12): 10812-10869.
doi: 10.1021/acscatal.9b02413
|
[13] |
Bae J G, Kuroda K, Ueda M. Proximity effect among cellulose-degrading enzymes displayed on the Saccharomyces cerevisiae cell surface. Applied and Environmental Microbiology, 2015, 81(1): 59-66.
doi: 10.1128/AEM.02864-14
|
[14] |
Bischof R H, Ramoni J, Seiboth B. Cellulases and beyond: the first 70 years of the enzyme producer Trichoderma reesei. Microbial Cell Factories, 2016, 15(1): 106.
doi: 10.1186/s12934-016-0507-6
pmid: 27287427
|
[15] |
Oh E J, Jin Y S. Engineering of Saccharomyces cerevisiae for efficient fermentation of cellulose. FEMS Yeast Research, 2020, 20(1): foz089.
doi: 10.1093/femsyr/foz089
|
[16] |
Andreu C, del Olmo M L. Yeast arming systems: pros and cons of different protein anchors and other elements required for display. Applied Microbiology and Biotechnology, 2018, 102(6): 2543-2561.
doi: 10.1007/s00253-018-8827-6
|
[17] |
Liu X, Cheng J, Zhang G, et al. Engineering yeast for the production of breviscapine by genomic analysis and synthetic biology approaches. Nature Communications, 2018, 9: 448.
doi: 10.1038/s41467-018-02883-z
|
[18] |
Liang B, Li L, Tang X J, et al. Microbial surface display of glucose dehydrogenase for amperometric glucose biosensor. Biosensors and Bioelectronics, 2013, 45: 19-24.
doi: 10.1016/j.bios.2013.01.050
pmid: 23454338
|
[19] |
Tabañag I D F, Chu I M, Wei Y H, et al. The role of yeast-surface-display techniques in creating biocatalysts for consolidated BioProcessing. Catalysts, 2018, 8(3): 94.
doi: 10.3390/catal8030094
|
[20] |
Fan L H, Zhang Z J, Yu X Y, et al. Self-surface assembly of cellulosomes with two miniscaffoldins on Saccharomyces cerevisiae for cellulosic ethanol production. PNAS, 2012, 109(33): 13260-13265.
doi: 10.1073/pnas.1209856109
|
[21] |
Tanaka T, Matsumoto S, Yamada M, et al. Display of active beta-glucosidase on the surface of Schizosaccharomyces pombe cells using novel anchor proteins. Applied Microbiology and Biotechnology, 2013, 97(10): 4343-4352.
doi: 10.1007/s00253-013-4733-0
|
[22] |
Anandharaj M, Lin Y J, Rani R P, et al. Constructing a yeast to express the largest cellulosome complex on the cell surface. Proceedings of the National Academy of Sciences of the United States of America, 2020, 117(5): 2385-2394.
|
[23] |
Yang X Y, Tang H T, Song M H, et al. Development of novel surface display platforms for anchoring heterologous proteins in Saccharomyces cerevisiae. Microbial Cell Factories, 2019, 18(1): 85.
doi: 10.1186/s12934-019-1133-x
|
[24] |
Yamada R, Taniguchi N, Tanaka T, et al. Cocktail delta-integration: a novel method to construct cellulolytic enzyme expression ratio-optimized yeast strains. Microbial Cell Factories, 2010, 9: 32.
doi: 10.1186/1475-2859-9-32
|
[25] |
Apiwatanapiwat W, Murata Y, Kosugi A, et al. Direct ethanol production from cassava pulp using a surface-engineered yeast strain co-displaying two amylases, two cellulases, and β-glucosidase. Applied Microbiology and Biotechnology, 2011, 90(1): 377-384.
doi: 10.1007/s00253-011-3115-8
pmid: 21327413
|
[26] |
Artzi L, Bayer E A, Moraïs S. Cellulosomes: bacterial nanomachines for dismantling plant polysaccharides. Nature Reviews Microbiology, 2017, 15 (2): 83-95.
doi: 10.1038/nrmicro.2016.164
pmid: 27941816
|
[27] |
Liang Y Y, Si T, Ang E L, et al. Engineered pentafunctional minicellulosome for simultaneous saccharification and ethanol fermentation in Saccharomyces cerevisiae. Applied and Environmental Microbiology, 2014, 80(21): 6677-6684.
doi: 10.1128/AEM.02070-14
|
[28] |
Fan S Q, Liang B, Xiao X X, et al. Controllable display of sequential enzymes on yeast surface with enhanced biocatalytic activity toward efficient enzymatic biofuel cells. Journal of the American Chemical Society, 2020, 142(6): 3222-3230.
doi: 10.1021/jacs.9b13289
|
[29] |
Cunha J T, Romaní A, Inokuma K, et al. Consolidated bioprocessing of corn cob-derived hemicellulose: engineered industrial Saccharomyces cerevisiae as efficient whole cell biocatalysts. Biotechnology for Biofuels, 2020, 13: 138.
doi: 10.1186/s13068-020-01780-2
|
[30] |
Camattari A, Goh A, Yip L Y, et al. Characterization of a panARS-based episomal vector in the methylotrophic yeast Pichia pastoris for recombinant protein production and synthetic biology applications. Microbial Cell Factories, 2016, 15(1): 139.
doi: 10.1186/s12934-016-0540-5
pmid: 27515025
|
[31] |
Liu X Y, Chi Z, Liu G L, et al. Inulin hydrolysis and citric acid production from inulin using the surface-engineered Yarrowia lipolytica displaying inulinase. Metabolic Engineering, 2010, 12(5): 469-476.
doi: 10.1016/j.ymben.2010.04.004
|
[32] |
Ni X M, Yue L X, Chi Z M, et al. Alkaline protease gene cloning from the marine yeast Aureobasidium pullulans HN2-3 and the protease surface display on Yarrowia lipolytica for bioactive peptide production. Marine Biotechnology (New York), 2009, 11( 1): 81-89.
|
[33] |
Liu Z, Inokuma K, Ho S H, et al. Improvement of ethanol production from crystalline cellulose via optimizing cellulase ratios in cellulolytic Saccharomyces cerevisiae. Biotechnology and Bioengineering, 2017, 114(6): 1201-1207.
doi: 10.1002/bit.26252
|
[34] |
Liu G L, Yue L X, Chi Z, et al. The surface display of the alginate lyase on the cells of Yarrowia lipolytica for hydrolysis of alginate. Marine Biotechnology, 2009, 11(5): 619-626.
doi: 10.1007/s10126-009-9178-1
|
[35] |
Yanase S, Hasunuma T, Yamada R, et al. Direct ethanol production from cellulosic materials at high temperature using the thermotolerant yeast Kluyveromyces marxianus displaying cellulolytic enzymes. Applied Microbiology and Biotechnology, 2010, 88(1): 381-388.
doi: 10.1007/s00253-010-2784-z
|
[36] |
Wang X D, Feng X D, Lv B, et al. Enhanced yeast surface display of β-glucuronidase using dual anchor motifs for high-temperature glycyrrhizin hydrolysis. AIChE Journal, 2019, 65(9): e16629.
|
[37] |
Grimm A R, Sauer D F, Polen T, et al. A whole cell E. coli display platform for artificial metalloenzymes: poly(phenylacetylene) production with a rhodium-nitrobindin metalloprotein. ACS Catalysis, 2018, 8(3): 2611-2614.
doi: 10.1021/acscatal.7b04369
|
[38] |
Sato H, Hayashi T, Ando T, et al. Hybridization of modified-heme reconstitution and distal histidine mutation to functionalize sperm whale myoglobin. Journal of the American Chemical Society, 2004, 126(2): 436-437.
doi: 10.1021/ja038798k
|
[39] |
Onoda A, Fukumoto K, Arlt M, et al. A rhodium complex-linked β-barrel protein as a hybrid biocatalyst for phenylacetylene polymerization. Chemical Communications (Cambridge, England), 2012, 48(78): 9756-9758.
doi: 10.1039/c2cc35165j
|
[40] |
Grimm A R, Sauer D F, Davari M D, et al. Cavity size engineering of a β-barrel protein generates efficient biohybrid catalysts for olefin metathesis. ACS Catalysis, 2018, 8(4): 3358-3364.
doi: 10.1021/acscatal.7b03652
|
[41] |
Dong M S, Li T P, Li S H, et al. Expression and enzymatic characterization of rice α-galactosidase II displayed on yeast cell surface. Process Biochemistry, 2019, 81: 57-62.
doi: 10.1016/j.procbio.2019.03.016
|
[42] |
Dong M S, Gong Y, Guo J, et al. Optimization of production conditions of rice α-galactosidase II displayed on yeast cell surface. Protein Expression and Purification, 2020, 171: 105611.
doi: 10.1016/j.pep.2020.105611
|
[43] |
Inokuma K, Hasunuma T, Kondo A. Efficient yeast cell-surface display of exo- and endo-cellulase using the SED1 anchoring region and its original promoter. Biotechnology for Biofuels, 2014, 7(1): 8.
doi: 10.1186/1754-6834-7-8
|
[44] |
Baek S H, Kim S, Lee K, et al. Cellulosic ethanol production by combination of cellulase-displaying yeast cells. Enzyme and Microbial Technology, 2012, 51(6-7): 366-372.
doi: 10.1016/j.enzmictec.2012.08.005
|
[45] |
Tsai S L, DaSilva N A, Chen W. Functional display of complex cellulosomes on the yeast surface via adaptive assembly. ACS Synthetic Biology, 2013, 2(1): 14-21.
doi: 10.1021/sb300047u
|
[46] |
Kim S, Baek S H, Lee K, et al. Cellulosic ethanol production using a yeast consortium displaying a minicellulosome and β-glucosidase. Microbial Cell Factories, 2013, 12: 14.
doi: 10.1186/1475-2859-12-14
|
[47] |
Liu Z, Inokuma K, Ho S H, et al. Combined cell-surface display- and secretion-based strategies for production of cellulosic ethanol with Saccharomyces cerevisiae. Biotechnology for Biofuels, 2015, 8: 162.
doi: 10.1186/s13068-015-0344-6
|
[48] |
Fan L H, Zhang Z J, Mei S, et al. Engineering yeast with bifunctional minicellulosome and cellodextrin pathway for co-utilization of cellulose-mixed sugars. Biotechnology for Biofuels, 2016, 9: 137.
doi: 10.1186/s13068-016-0554-6
|
[49] |
Liu Z, Ho S H, Sasaki K, et al. Engineering of a novel cellulose-adherent cellulolytic Saccharomyces cerevisiae for cellulosic biofuel production. Scientific Reports, 2016, 6: 24550.
doi: 10.1038/srep24550
|
[50] |
Tabañag I D F, Chu I M, Wei Y H, et al. Ethanol production from hemicellulose by a consortium of different genetically-modified Sacharomyces cerevisiae. Journal of the Taiwan Institute of Chemical Engineers, 2018, 89: 15-25.
doi: 10.1016/j.jtice.2018.04.029
|
|
Viewed |
|
|
|
Full text
|
|
|
|
|
Abstract
|
|
|
|
|
Cited |
|
|
|
|
|
Shared |
|
|
|
|
|
Discussed |
|
|
|
|