真菌中苦马豆素生物合成途径及相关基因研究进展*

杨帆, 卢萍

中国生物工程杂志 ›› 2023, Vol. 43 ›› Issue (10) : 109-119.

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中国生物工程杂志 ›› 2023, Vol. 43 ›› Issue (10) : 109-119. DOI: 10.13523/j.cb.2303051
综述

真菌中苦马豆素生物合成途径及相关基因研究进展*

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Advances in Research on Swainsonine Biosynthesis Pathway and Related Genes in Fungi

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摘要

苦马豆素(swainsonine,SW)是由真菌合成的一类吲哚里西啶类生物碱,可以引起哺乳动物疯草病,同时也是一种具有潜力的抗癌药物。SW在不同真菌中的合成途径各不相同,主要通过多基因调控的次生代谢途径产生。早期研究发现酵母氨酸还原酶基因sac可促进真菌合成SW,疯草内生真菌中的吡咯啉-5-羧酸还原酶(pyrroline-5-carboxylate reductase,P5CR)可催化合成哌啶酸,哌啶酸是合成SW的底物,真菌中的SWN基因簇各基因所编码的酶催化从哌啶酸到SW的各步反应。综述豆类丝核菌(Rhizoctonia leguminicola)、罗伯茨绿僵菌(Metarhizium robertsii)及疯草内生真菌中的SW合成途径及相关基因的研究进展,为深入揭示真菌SW的生物合成途径与调控机制提供重要参考,同时对未来疯草SW的控制和利用也具有一定重要意义。

Abstract

The indolizidine alkaloid swinsonine (SW), which is produced by fungi, induces severe locoweed diseases in mammals. SW is a potential anti-cancer medication. Different fungi have various swainsonine synthesis pathways. A number of genes regulate the secondary metabolism of SW synthesis pathways. Early research revealed that the sac gene can promote the level of SW produced. Subsequently, P5CR (pyrroline-5-carboxylate reductase), a catalytic enzyme for the synthesis of pipecolic acid, has been found in endophytic fungi of locoweed. Later, the SWN gene cluster is proposed and the enzymes that each gene in the SWN gene cluster encodes for are mainly responsible for catalyzing the reactions that transform pipecolic acid to SW. In this paper, the research on the SW synthetic pathways of Rhizoctonia leguminicola, Metarhizium robertsii, and endophytic fungi of locoweed is reviewed.

关键词

内生真菌 / 苦马豆素 / 次生代谢 / SWN基因簇

Key words

Endophytic fungi / Swainsonine / Secondary metabolism / SWN gene cluster

引用本文

导出引用
杨帆, 卢萍. 真菌中苦马豆素生物合成途径及相关基因研究进展*[J]. 中国生物工程杂志, 2023, 43(10): 109-119 https://doi.org/10.13523/j.cb.2303051
Fan YANG, Ping LU. Advances in Research on Swainsonine Biosynthesis Pathway and Related Genes in Fungi[J]. China Biotechnology, 2023, 43(10): 109-119 https://doi.org/10.13523/j.cb.2303051
中图分类号: Q78   
中国西部[1-3]、北美地区[4-5]和澳洲[6]等地分布着一类被称为疯草的植物,家畜误食疯草后会得疯草病,导致疾病的主要原因是疯草中含有的有毒成分苦马豆素(swainsonine,SW)(图1)[7]。疯草是含SW的黄芪属(Astragalus)和棘豆属(Oxytropis)植物的统称,SW是吲哚里西啶类生物碱,可抑制细胞内甘露糖苷酶的活性,从而引发相关症状,造成畜牧业的重大损失。SW主要通过疯草内生真菌和树牵牛属(Pharbitis)植物内生真菌的次生代谢产生[8-10],植物本身并不产生SW。研究人员在少数昆虫病原体的真菌和人类皮肤癣病原体的真菌中也检测到了SW[11]。SW最初是从灰苦马豆(Swainsona canescen)中分离得到[12],其合成途径最早在豆类丝核菌(Rhizoctonia leguminicola)中被预测[13],但并未提出与SW合成关系密切的基因。对可产生SW的树牵牛内生真菌(Ipomoea carnea endophyte,ICE)进行测序[14],并对多种能够合成SW的真菌进行比较基因组学分析,发现真菌中存在与SW合成关系紧密的SWN基因簇[11]。我国西北地区含SW的植物对畜牧业发展造成了危害[15-16],从而引起了研究人员对疯草内生真菌、SW合成相关基因及合成途径的关注[16-18]。SW合成途径涉及多个基因,在各种真菌中存在差异,对SW合成的相关基因及主要合成途径进行综述,为深入揭示真菌SW的生物合成途径与调控机制提供重要参考,同时对未来疯草SW的控制和利用也具有一定重要意义。
图1 SW的结构式

Fig.1 Structure of SW

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1 真菌中SW的生物合成途径

真菌中SW的合成通过多基因控制的次生代谢途径产生,早期对SW合成途径的研究主要在豆类丝核菌(Rhizoctonia leguminicola)中进行[19],预测R. leguminicola中SW的生物合成途径为:首先,L-赖氨酸(L-lysine)被还原为酵母氨酸(saccharopine),在酵母氨酸还原酶(saccharopine reductase,Sac)的作用下,酵母氨酸被还原为α-氨基己二酸半醛,通过构型改变,α-氨基己二酸半醛生成哌啶-6-羧酸(delta-1-piperideine-6-carboxylate,P6C),P6C在6-羟基哌啶酸还原酶(6-carboxyl-Pipecolic acid reductase)的催化下进一步生成哌啶酸(pipecolic acid),哌啶酸经还原环化成1-酮基吲哚里西啶(1-oxoindolizidine),1-酮基吲哚里西啶在1-酮基吲哚里西啶还原酶(1-oxoindolizidine reductase)的作用下生成1-羟基吲哚里西啶(1-hydroxyindolizine),之后反应生成1, 2-二羟基吲哚里西啶(1, 2-dihydroxyindolizine),最后1, 2-二羟基吲哚里西啶经羟化反应生成SW[19-20](图2)。
图2 豆类丝核菌中SW部分合成途径

Fig.2 Partial synthesis pathways of SW from Rhizoctonia leguminicola

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R. leguminicola中由哌啶酸合成SW的过程并不清晰。通过对产SW的内生真菌ICE基因组序列信息进行比较基因组学研究,发现产SW真菌存在SWN基因簇[14],该基因簇共有七个成员,分别为:swnAswnH1swnH2swnKswnNswnRswnT。Cook等[11]在罗伯茨绿僵菌(Metarhizium robertsii)中推测了从哌啶酸到SW的主要合成途径:哌啶酸和丙二酰-CoA(malonyl-CoA)在多功能酶SwnK的各个结构域和还原酶SwnR(或SwnN)的作用下逐步形成1-羟基吲哚里西啶,之后经加氧酶SwnH1和SwnH2的氧化作用,由SwnR(或SwnN)被还原形成SW(图3),该研究未涉及哌啶酸如何生成。Luo等[21]M. robertsii中也对SW的合成途径进行了预测:赖氨酸通过赖氨酸转氨基酶(lysine aminotransferase,LAT)途径[22]或赖氨酸环脱氨酶(lysine cyclodeaminase,LCD)途径合成哌啶酸,其中LAT途径是赖氨酸在SwnA(氨基转移酶)的作用下形成P6C,之后经SwnR(还原酶)催化形成哌啶酸,而LCD途径是赖氨酸经赖氨酸环脱氨酶(lysine cyclodeaminase,LCD)直接催化形成哌啶酸;由多功能酶SwnK通过多结构域相互作用形成(8aS)-1-酮基吲哚里西啶[(8aS)-1-oxoindolizidine]、(1S, 8aS)-1-羟基吲哚里西啶[(1S, 8aS)-1-hydroxyindolizine]、(1R, 8aS)-1-羟基吲哚里西啶[(1R, 8aS)-1-hydroxyindolizine],之后通过SwnH2(加氧酶)形成(1R, 2S, 8aS)-1, 2-二羟基吲哚里西啶[(1R, 2S, 8aS)-1, 2-dihydroxyindolizine]、(1S, 2S, 8aS)-1, 2-二羟基吲哚里西啶[(1S, 2S, 8aS)-1, 2-dihydroxyindolizine]或(1S, 2R, 8aS)-1, 2-二羟基吲哚里西啶[(1S, 2R, 8aS)-1, 2-dihydroxyindolizine];(1R, 2S, 8aS)-1, 2-二羟基吲哚里西啶、(1S, 2S, 8aS)-1, 2-二羟基吲哚里西啶在SwnH1的两步异构作用(先催化氧化再催化异构化)下形成SW,(1S, 2R, 8aS)-1, 2-二羟基吲哚里西啶则在SwnH1的异构作用下形成SW(图4)。
图3 罗伯茨绿僵菌中SW部分合成途径[11]

Fig.3 Partial synthesis pathways of SW in Metarhizium robertsii[11]

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图4 罗伯茨绿僵菌中SW合成途径[21]

Fig.4 Synthesis pathways of SW in M. robertsii[21]

1: P6C; 2: Pipecolic acid; 3: (8aS)-1-Oxoindolizidine; 4: (1S, 8aS)-1-Hydroxyindolizine; 5: (1R, 8aS)-1-Hydroxyindolizine; 6: (1R, 2S, 8aS)-1, 2-Dihydroxyindolizine; 7: (1S, 2S, 8aS)-1, 2-Dihydroxyindolizine; 8: (1S, 2R, 8aS)-1, 2-Dihydroxyindolizine

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Lu等[23]在对我国内蒙古主要疯草小花棘豆(Oxytropis glabra)内生真菌Alternaria oxytropis OW7.8分离及SW生物合成途径的研究中,构建了sac基因的敲除突变株M1,将其与野生株A. oxytropis OW7.8进行转录组测序分析[24],推测A. oxytropis OW7.8中SW的生物合成也可以分为P6C和哌啶-2-羧酸(delta 1-piperideine-2-carboxylate, P2C)两部分。A. oxytropis OW7.8中赖氨酸合成哌啶酸的过程与R. leguminicola类似:由Sac催化赖氨酸合成酵母氨酸,酵母氨酸还原为α-氨基己二酸半醛,α-氨基己二酸半醛脱氢环化形成P6C,最后P6C通过吡咯啉-5-羧酸还原酶(pyrroline-5-carboxylate reductase,P5CR)催化形成哌啶酸。然而,A. oxytropis OW7.8中可能还存在另一条分支P2C的合成途径来合成哌啶酸:L-赖氨酸在L-赖氨酸-α-氧化酶(L-lysyl-alpha-oxidase)的作用下形成6-氨基-2-氧己酸酯(6-amino-2-oxohexanoate),6-氨基-2-氧己酸酯异构化形成P2C,随后在Δ-1-哌啶-2-羧酸还原酶(delta-1-piperideine-2-carboxylate reductase,lhpD/dpkA)及1-哌啶-2-羧酸还原酶(1-piperideine-2-carboxylate reductase,lhpI)催化下形成哌啶酸。A. oxytropis OW7.8中从哌啶酸合成SW的过程与M. robertsii基本相同,由SWN基因簇成员(swnH1swnH2swnKswnNswnR)编码的酶催化,对A. oxytropis OW7.8中SW生物合成途径的预测如图5所示。
图5 Alternaria oxytropis OW7.8中SW生物合成途径预测

Fig.5 Prediction of SW biosynthetic pathway in Alternaria oxytropis OW7.8

LYS1: Saccharopine reductase[NAD(+), L-lysine-forming] [EC:1.5.1.7]; LYS9: Saccharopine reductase(NADP, L-glutamate-forming) [EC:1.5.1.10]; lysDH: L-Lysine-6-dehydrogenase [EC:1.4.1.18]; AASS: Alpha-aminoadipic semialdehyde synthase [EC:1.5.1.8]; dpkA/lhpD: Delta-1-piperideine-2-carboxylate reductase [1.5.1.21]; lhpI:1-Piperideine-2-carboxylate reductase [EC:1.5.1.1]; PIPOX: Sarcosine oxidase/L-Pipecolate oxidase [EC:1.5.3.1][EC:1.5.3.7]

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2 真菌中SW合成相关基因

研究表明,SW是真菌中多个基因编码的不同酶催化合成的次生代谢产物[1,9,14]。早期研究发现,sac基因与SW的合成相关[19],大多数真菌都含有sac基因,该基因主要用于合成赖氨酸和谷氨酸(glutamate)。在疯草内生真菌中发现P5CR酶可催化SW的底物哌啶酸的合成,随后提出存在控制SW生物合成的SWN基因簇[11]。SWN基因簇成员编码的酶主要控制从哌啶酸到SW的生物合成过程,对SWN基因簇的研究也逐渐成为热点[21,25 -26]

2.1 酵母氨酸还原酶基因

酵母氨酸还原酶(saccharopine reductase,Sac)(EC 1.5.1.10)基因(sac)编码酵母氨酸还原酶,Sac是双向酶,在不同pH下分别催化正反应和逆反应[27]。正反应催化α-氨基己二酸半醛和谷氨酸生成酵母氨酸,逆反应催化酵母氨酸生成α-氨基己二酸半醛(图6),酵母氨酸和α-氨基己二酸半醛都是形成SW的重要中间产物[19,28]
图6 酵母氨酸催化的双向反应[27]

Fig.6 A two-way reaction catalyzed by saccharopine reductase [27]

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在金龟子绿僵菌(Metarhizium anisopliae)中研究发现,酵母氨酸氧化酶(saccharopine oxidase,FAP2)催化赖氨酸形成酵母氨酸,之后由Sac催化酵母氨酸产生P6C,P6C经一系列反应生成SW[13](图7),sac基因的敲除可能会导致SW水平提高[29]。然而,在A. oxytropis OW7.8中构建的sac基因敲除突变株M1中发现,sac基因的缺失会导致SW水平降低[30]。这是由于M1中sac基因缺失,酵母氨酸和赖氨酸的合成受阻,而赖氨酸是真菌的必需氨基酸,酵母氨酸是赖氨酸合成前体,可能需要从逆反应方向即在酵母氨酸氧化酶催化下使P6C转变成酵母氨酸,之后合成赖氨酸以维持真菌的基本生命活动。P6C是SW的前体,SW是次生代谢产物,真菌需要量并不大,故M1中SW生成量低于OW7.8中的生成量。因此,早期研究的结果可能只反映了真菌生长中特定时刻SW的合成情况。sac基因在SW生物合成过程中具有重要作用,在野生株OW7.8和sac基因敲除突变株M1中添加底物(如酵母氨酸、α-氨基己二酸、赖氨酸和哌啶酸),对内生真菌的SW合成动态变化进行分析发现,敲除株M1的SW水平总是比野生株低,而添加底物后的SW水平均有提高[18]。在对Undifilum oxytropis进行基因组测序分析的研究中,同样预测Sac酶在SW合成过程中起到关键作用[31]
图7 金龟子绿僵菌中Sac酶催化L-赖氨酸形成P6C[13]

Fig.7 Sac catalyzes the formation of P6C from L-lysine in Metarhizium anisopliae[13]

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2.2 SWN基因簇

通过对链格孢属(Alternaria spp.)、节皮菌属(Arthroderma spp.)、绿僵菌属(Metarhizium spp.)等34种真菌进行比较基因组学分析,发现了与SW合成关系密切的SWN基因簇[14]。SWN基因簇成员主要有七个,分别为:swnAswnH1swnH2swnKswnNswnRswnT。通过对可产生SW的树牵牛内生真菌(Ipomoea carnea endophyte,ICE)进行基因组测序[14],利用隐马尔可夫模型(hidden Markov models,HMM)与M. robertsii ARSEF 23基因组测序结果进行多序列比对,推测了SWN基因簇的成员在SW的合成过程中的功能[32](表1)。SWN基因簇成员编码的酶主要催化从哌啶酸到SW的合成过程,在不同真菌中SWN基因簇成员的组成存在差异,这也导致了不同真菌中SW合成途径各不相同。
表1 SWN基因簇基因编码产物的预测功能

Table 1 Predicted functions of SWN gene coding products

基因 功能
swnA 氨基转移酶
swnN 脱氢酶、还原酶
swnR 脱氢酶、还原酶
swnH1 氧戊二酸酯、Fe依赖的加氧酶
swnH2 氧戊二酸酯、Fe依赖的加氧酶
swnT 氨基酸转运体
swnK 非核糖肽-聚酮合酶(多功能)

2.2.1 swnA基因

swnA基因编码氨基转移酶,SwnA酶在SW的生物合成过程中主要催化赖氨酸发生转氨基作用形成P6C[33]。并非所有产SW的真菌都含有swnA基因,swnA基因仅存在于OnygenalesHypocreales(除了Fusarium sp.)和其他的一些分类单元中[33]

2.2.2 swnR基因

swnR基因编码Rossmann-fold家族还原酶[34],除Trichophyton mentagrophytes以外,所有可产生SW的真菌中都含有swnR基因[10]。在早期对M. robertsii的研究中,认为SwnR酶是催化1-羟基吲哚里西啶形成和1, 2-二羟基吲哚里西啶转变为SW的关键酶[11],后经部分实验验证和推测,认为SwnR酶是催化P6C合成哌啶酸的关键酶[21]。在M. anisopliaeswnR敲除突变株中,SW的水平显著下调,证明swnR基因在SW合成途径中具有重要作用,但不排除有其他基因能够补充或代替swnR基因[26]

2.2.3 swnN基因

swnN基因编码一种还原酶。与SwnR酶相同,早期研究认为SwnN酶是催化1-羟基吲哚里西啶形成和1, 2-二羟基吲哚里西啶转变为SW的关键酶,后来在M. robertsii中发现,SwnN酶可能是催化1-酮基吲哚里西啶合成1-羟基吲哚里西啶的关键酶[21]

2.2.4 swnH2基因

swnH2基因编码FeⅡ/α-酮戊二酸依赖氧化酶,该酶属于P450蛋白家族[31],在M. robertsii中的主要作用是催化1-羟基吲哚里西啶氧化生成1, 2-二羟基吲哚里西啶[21]swnAswnRswnN的缺失会导致M. robertsii SW产量降低,而swnH2基因的缺失会导致真菌无法产生SW。目前已报道可产生SW的真菌都含有swnH2基因[33],这说明swnH2基因在SW合成中起着重要作用。

2.2.5 swnH1基因

swnH1基因编码FeⅡ/α-酮戊二酸依赖氧化酶[31],其主要作用是将1, 2-二羟基吲哚里西啶转变为SW[21]。与swnH2基因相同,swnH1基因的缺失也会导致真菌中无法检测到SW[21]

2.2.6 swnT基因

swnT基因在真菌中很少被发现[33],其编码的蛋白功能可能是介导SW的转运,该蛋白在SW的生物合成中是否起作用仍有待研究[11,21]

2.2.7 swnK基因

swnK基因编码聚酮合酶-非核糖体肽合酶(nonribosomal peptide-polyketide synthase,PKS-NRPS)。对产SW真菌PKS-NRPS结构域的功能进行预测(表2),发现A结构域将哌啶酸酰基化,之后将哌啶酸酰基化后的中间产物与T结构域的磷酸泛酰巯基乙胺连接物位点结合,丙二酰-CoA通过KS结构域催化后与哌啶酸结合形成酮类化合物,通过AT结构域将所形成的酮类化合物转移至酰基载体蛋白ACP的磷酸泛酰巯基乙胺连接物位点,随后通过KR结构域将羰基催化还原为羟基,最后通过R结构域将ACP结合并被KR结构域催化还原的中间产物还原为1-酮基吲哚里西啶或1-羟基吲哚里西啶(图8)。
表2 swnK所编码的PKS-NRPS结构域及其功能[7,22]

Table 2 PKS-NRPS domain encoded by swnK and its functions[7,22]

结构域 功能
A 腺苷酰(化)作用
T 硫醇化作用
KS β-酮酰基合成酶
AT 脂肪酰转移酶
KR 酮还原酶
ACP 酰基载体蛋白
R 还原酶
图8 swnK基因编码的蛋白各个结构域催化的过程

Fig.8 The pathway catalyzed by each domain of the protein encoded by the swnK gene

Full size|PPT slide

对波状芽管孢真菌(Alternaria sect. undifilum spp.)中PKS-NRPS的KS结构域进行研究,发现KS结构域对SW合成具有重要作用[35]。在A. oxytropis OW7.8中克隆swnK基因,敲除其编码的ACP结构域部分,在敲除突变株中未能检测到SW[36]。真菌中swnK基因的表达量变化与SW产量变化一致[37],M. robertsiiM. anisopliaeswnK敲除株无法产生SW[21,38],说明swnK基因在SW的合成过程中具有重要作用。产SW的真菌都含swnK基因,所有含swnK基因的真菌类群也含swnH2[33],swnK基因和swnH2基因可能在进化中由同一个祖先基因演变而来。

2.3 P5CR基因

吡咯啉-5-羧酸还原酶(pyrroline-5-carboxylate reductase,P5CR)是植物合成脯氨酸的关键酶,对于植物的抗干旱胁迫具有一定作用[39-41]。在产SW的内生真菌中也存在P5CR基因。SW的生物合成过程中,哌啶酸是关键前体之一,对大肠杆菌中哌啶酸合成途径进行推测,其过程为:L-赖氨酸在赖氨酸-6-氨基转移酶(L-lysine-6-aminotransferase)的作用下形成α-氨基己二酸半醛,通过构象改变,α-氨基己二酸半醛转变为P6C,P6C在P5CR酶的催化作用下形成L-哌啶酸(也称L-高脯氨酸,L-homoproline,CAS:3105-95-1)[42-43](图9)。在A. oxytropis OW7.8中敲除sac基因,发现敲除突变株M1与野生株相比,SW水平下降,随后通过转录组测序分析预测了41个表达差异基因可能与SW的生物合成相关[24],其中包括P5CR基因。在推测的合成途径中,P5CR酶催化P6C生成哌啶酸,之后通过几步反应生成SW[8]。Zhang等[44]对黄花棘豆内生真菌A. oxytropis进行基因组测序,发现P5CR基因也包含在SWN基因簇序列上,其作用可能与swnR基因相同或相似,目前在其他的产SW真菌中尚无相关报道。
图9 哌啶酸的合成途径

Fig.9 Synthesis pathways of pipecolic acid

Full size|PPT slide

3 展望

疯草蔓延对畜牧业造成极大危害,但疯草的有毒成分SW却是一种具有潜力的抗癌药物[45-48]。研究表明,动物摄取SW后可以刺激自然杀伤细胞(natural killer cell,NK)并激活淋巴因子(lymphokines),从而达到抗癌作用[49]。因此,探索真菌中SW的生物合成途径具有十分重要的医用价值。无论是Metarhizium spp.,还是疯草内生真菌,都需要哌啶酸来合成SW。研究表明,在培养基中添加哌啶酸可以增加SW的产量[18,21],这说明哌啶酸是合成SW的重要前体。Metarhizium spp.可以通过根际定殖为植物提供哌啶酸来诱导植保素等合成,从而提高植物的抗病虫活性[50]。在植物和疯草内生真菌中都有催化合成哌啶酸的P5CR酶,宿主植物和真菌之间是否存在该基因的横向转移等都有待研究。
swnK基因编码的PKS-NRPS酶被认为是产生SW的关键基因[33]。PKS-NRPS酶是真菌中常见的酶,主要与次生代谢产物的合成有关[51-53]。值得注意的是,在RNAi干扰swnK基因的M. anisopliae菌株中,该菌株的细胞壁也发生了变化[38,54],这说明真菌的一部分初生代谢受swnK基因功能的影响。
疯草内生真菌是丝状真菌,同源重组率低,基因敲除难度大[55-57],体外培养真菌生长缓慢,这使得对疯草内生真菌中SWN基因簇成员的研究相对较少。在未来的研究中,可在A. oxytropis OW 7.8中继续挖掘swnKswnH1swnH2swnKswnNswnR等基因的功能及其对SW合成的作用,可利用基因敲除和过表达、异源表达等方式进一步探究。SW的生物合成途径是多基因调控的次生代谢过程,其合成及调控机制十分复杂,细节仍未阐释清楚。一些中间产物含同分异构体,分离和纯化难度大,可针对这些问题进行技术优化[58],如核磁共振(nuclear magnetic resonance,NMR)、液相色谱-质谱联用(liquid chromatography-mass spectrometry,LC-MS)等,也可以在模式微生物(如酵母菌)中构建SW的合成途径[59],从而深入研究SW生物合成的分子机制和代谢途径。

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摘要
疯草是指含苦马豆素的豆科黄芪属和棘豆属有毒植物,能引发家畜疯草病。疯草的分布比较广泛,属于世界性有毒植物,近年来疯草蔓延迅速,在一些地区已经造成草地毒草化,频繁出现放牧家畜中毒死亡现象,严重威胁草地畜牧业发展。研究表明,疯草的毒性与其含有的苦马豆素有关,但苦马豆素却不是疯草自身代谢产物,而是疯草携带内生真菌的代谢产物,此外苦马豆素还是一种良好抗肿瘤药物。笔者结合国内外相关研究对疯草的分布、危害、防治及毒性成分研究进展进行综述,并对疯草分类、研究地域及利用前景进行了讨论。
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摘要
疯草专门指含苦马豆素、采食后引起慢性神经机能障碍、表现发疯样症状的一类毒草,由此所致中毒称为疯草病,主要分布在美国西部。近年来我国疯草面积不断增大,危害程度超过雪灾和疫病,已经成为危害我国西部草原畜牧业可持续发展的严重毒草。美国从19世纪末就开始疯草生物学、生态学、毒理学及其动物中毒病研究,是世界上率先开展疯草研究的国家,在应对草地疯草灾害防控方面具有丰富经验。我国天然草地疯草研究起步晚,与美国有很大差距。本文就美国天然草地疯草的研究历史、种类分布、灾害状况、毒理学和疯草防治技术等方面的进展进行归纳总结,旨在为我国天然草地疯草中毒病的致病机制和灾害防控技术研究提供借鉴。
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摘要
为探明青海野生型斜茎黄芪(Astragalus adsurgens)是否存在产苦马豆素内生真菌,本试验采用植物组织表面消毒法对斜茎黄芪内生真菌进行分离培养,运用形态学观察和内部转录间隔区(Internal transcribed spacer,ITS)序列分析鉴定分离获得的内生真菌种属,并构建系统发育树,应用薄层层析法对斜茎黄芪和优势菌发酵液中的苦马豆素进行检测。结果显示,从斜茎黄芪中共分离出26株菌株,分属于5纲、5目、7科、7属,4株未定属。其中由根中分离的链格孢菌属(Alternaria sp.)是斜茎黄芪的优势菌属,分离率为23.08%。从薄层层析结果可以看出,斜茎黄芪和优势菌发酵液中均未检测到苦马豆素。上述结果表明,野生型斜茎黄芪不属于疯草类有毒植物,这为该植物的后续资源化利用提供重要理论依据。
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The indolizidine alkaloid swainsonine (SW) is a deadly mycotoxin to livestock that can be produced by different plant-associated fungi, including the endophytic entomopathogenic fungi species. The SW biosynthetic gene cluster has been identified but the genetic mechanism of SW biosynthesis remains obscure. To unveil the SW biosynthetic pathway, we performed gene deletions in, heterologous expression of a core biosynthetic gene, substrate feedings, mass spectrometry, and bioassay analyses in this study. It was unveiled that SW is produced via a multibranched pathway by the hybrid nonribosomal peptide-polyketide synthase (NRPS-PKS) gene cluster in. The precursor pipecolic acid can be converted from lysine by both the SW biosynthetic cluster and the unclustered genes such as lysine cyclodeaminase. The hybrid NRPS-PKS enzyme produces three intermediates with and without domain skipping. Intriguingly, the biosynthetic process is coupled with the to nonenzymatic epimerization of C1-OH for both hydroxyl- and dihydroxyl-indolizidine intermediates. We also found that SW production was dispensable for fungal colonization of plants and infection of insect hosts. Functional characterization of the SW biosynthetic genes in this study may benefit the safe use of fungi as insect biocontrol agents and the management of livestock pastures from SW contamination by genetic manipulation of the toxin-producing fungi.
[22]
Pérez-García F, Peters-Wendisch P, Wendisch V F. Engineering Corynebacterium glutamicum for fast production of L-lysine and L-pipecolic acid. Applied Microbiology and Biotechnology, 2016, 100(18): 8075-8090.
The Gram-positive Corynebacterium glutamicum is widely used for fermentative production of amino acids. The world production of L-lysine has surpassed 2 million tons per year. Glucose uptake and phosphorylation by C. glutamicum mainly occur by the phosphotransferase system (PTS) and to lesser extent by inositol permeases and glucokinases. Heterologous expression of the genes for the high-affinity glucose permease from Streptomyces coelicolor and Bacillus subtilis glucokinase fully compensated for the absence of the PTS in Δhpr strains. Growth of PTS-positive strains with glucose was accelerated when the endogenous inositol permease IolT2 and glucokinase from B. subtilis were overproduced with balanced translation initiation rates using plasmid pEKEx3-IolTBest. When the genome-reduced C. glutamicum strain GRLys1 carrying additional in-frame deletions of sugR and ldhA to derepress glycolytic and PTS genes and to circumvent formation of L-lactate as by-product was transformed with this plasmid or with pVWEx1-IolTBest, 18 to 20 % higher volumetric productivities and 70 to 72 % higher specific productivities as compared to the parental strain resulted. The non-proteinogenic amino acid L-pipecolic acid (L-PA), a precursor of immunosuppressants, peptide antibiotics, or piperidine alkaloids, can be derived from L-lysine. To enable production of L-PA by the constructed L-lysine-producing strain, the L-lysine 6-dehydrogenase gene lysDH from Silicibacter pomeroyi and the endogenous pyrroline 5-carboxylate reductase gene proC were overexpressed as synthetic operon. This enabled C. glutamicum to produce L-PA with a yield of 0.09 ± 0.01 g g(-1) and a volumetric productivity of 0.04 ± 0.01 g L(-1) h(-1).To the best of our knowledge, this is the first fermentative process for the production of L-PA from glucose.
[23]
Lu P, Li X, Wang S Y, et al. Saccharopine reductase influences production of swainsonine in Alternaria oxytropis. Sydowia, 2021, 73: 69-74.
[24]
Li X, Lu P. Transcriptome profiles of Alternaria oxytropis provides insights into swainsonine biosynthesis. Scientific Reports, 2019, 9(1): 6021.
Swainsonine (SW) is a toxic alkaloid biosynthesized by the endophytic fungus Alternaria oxytropis in Oxytropis glabra. The biosynthetic pathway of SW is poorly understood. Saccharopine reductase/dehydrogenase of fungus plays an important role in this pathway. The gene knocked out mutant M1 in A. oxytropis was constructed in our previous work. In this study, the transcriptome of wild-strain OW7.8 and M1 was firstly sequenced to understand the biosynthetic pathway and molecular mechanism of SW in A. oxytropis. A total of 45,634 Unigenes were annotated. 5 genes were up-regulated and 11,213 genes were down-regulated. 41 Unigenes possibly related to the biosynthesis of SW were identified by data analyzing. The biosynthesis pathway of SW in the fungus was speculated, including two branches of P6C and P2C. Delta1-piperidine-2-carboxylate reductase, lysine 6-dehydrogenase, and saccharopine oxidase/L-pipecolate oxidase were involved in P6C. 1-piperidine-2-carboxylate/1-pyrroline-2- carboxylate reductase [NAD(P)H] and delta1-piperidine-2-carboxylate reductase were involved in P2C. Saccharopine reductase was involved in both. In addition, 1-indolizidineone was considered to be the direct precursor in the synthesis of SW, and the hydroxymethylglutaryl-CoA lyase catalyzed the synthesis of SW. Here we analyzed details of the metabolic pathway of A. oxytropis SW, which is of great significance for the follow-up research.
[25]
余永涛, 毛彦妮, 赵清梅, 等. 甲基磺酸乙酯诱变的棘豆链格孢菌菌株苦马豆素合成基因簇相关基因表达模式分析. 畜牧兽医学报, 2022, 53(4): 1241-1251.
Yu Y T, Mao Y N, Zhao Q M, et al. Expression pattern analysis of related genes in SWN gene cluster of Alternaria oxytropis mutated by ethyl methylate. Acta Veterinaria et Zootechnica Sinica, 2022, 53(4): 1241-1251.
[26]
孙璐, 宋润杰, 路浩, 等. swnR基因在金龟子绿僵菌合成苦马豆素中的作用. 畜牧兽医学报, 2021, 52(5): 1439-1446.
Sun L, Song R J, Lu H, et al. The role of swnR gene on the biosynthetic pathway of the swainsonine in Metarhizium anisopliae. Acta Veterinaria et Zootechnica Sinica, 2021, 52(5): 1439-1446.
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Storts D R, Bhattacharjee J K. Purification and properties of saccharopine dehydrogenase (glutamate forming) in the Saccharomyces cerevisiae lysine biosynthetic pathway. Journal of Bacteriology, 1987, 169(1): 416-418.
Saccharopine dehydrogenase (glutamate forming) of the biosynthetic pathway of lysine in Saccharomyces cerevisiae was purified 1,122-fold by using acid precipitation, ammonium sulfate precipitation, DEAE-Sepharose, gel filtration, and Reactive Red-120 agarose chromatography. The enzyme exhibited a native molecular size of 69,000 daltons by gel filtration and consisted of a single 50,000-dalton polypeptide based upon sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The enzyme was readily denatured by exposures to temperatures exceeding 46 degrees C. The pH optimum for the reverse reaction was 9.5. The apparent Kms for L-saccharopine and NAD+ were 2.32 and 0.054 mM, respectively. The enzyme was inhibited by mercuric chloride but not by carbonyl or metal complexing agents.
[28]
Wickwire B M, Wagner C, Broquist H P. Pipecolic acid biosynthesis in Rhizoctonia leguminicola. II. saccharopine oxidase: a unique flavin enzyme involved in pipecolic acid biosynthesis. Journal of Biological Chemistry, 1990, 265(25): 14748-14753.
The fungal parasite Rhizoctonia leguminicola produces two indolizidine alkaloids, slaframine and swainsonine, of physiological interest. These alkaloids are biosynthesized from pipecolic acid which in turn is derived from L-lysine in this fungus as shown in the accompanying paper (Wickwire, B.M., Harris, C.M., Harris, T.M., and Broquist, H.P. (1989) J. Biol. Chem. 265, 14742-14747): L-lysine----saccharopine----delta 1----piperideine-6- carboxylate----pipecolate. This paper concerns the discovery, purification, and properties of a flavoenzyme, termed saccharopine oxidase, which carries out the oxidative cleavage of saccharopine as follows: Saccharopine + O2----delta 1-piperidine-6-carboxylate + glutamate + H2O2 The enzyme was purified 2,000-fold to homogeneity (polyacrylamide gel electrophoresis) in 14% yield from R. leguminicola mycelia, and had a native molecular mass of about 45,000 daltons by gel filtration (fast protein liquid chromatography Superose). Evidence for the presence of a flavin in the enzyme was drawn from these considerations: (a) the enzyme, while oxidatively cleaving saccharopine, concomitantly reduces 2,6-dichlorophenolindophenol; (b) the purified enzyme has a fluorescence spectrum typical of flavins; and (c) the enzyme requires oxygen and produces hydrogen peroxide. Good correlation was shown with purified saccharopine oxidase between disappearance of saccharopine with the concomitant appearance of delta 1-piperideine-6-carboxylate plus glutamate. The enzyme has a pH optimum about 6 and a Km for saccharopine of 0.128 mM. The enzyme apparently exists in R. leguminicola to shunt saccharopine, a major lysine metabolite, into a secondary pathway of lysine metabolism leading to pipecolate and subsequently to slaframine and swainsonine.
[29]
Mukherjee S, Dawe A L, Creamer R. Potential role for saccharopine reductase in swainsonine metabolism in endophytic fungus, Undifilum oxytropis. Fungal Biology, 2012, 116(8): 902-909.
Locoweed plants in the southwestern United States often harbour a slow-growing endophytic fungus, Undifilum oxytropis (Phylum: Ascomycota; Order: Pleosporales), which produces a toxic alkaloid, swainsonine. Consumption of U. oxytropis by grazing animals induces a neurological disorder called locoism for which the toxic alkaloid swainsonine has been reported to be the causal agent. Little is known about the biosynthetic pathway of swainsonine in endophytic fungi, but previous studies on non-endophytic ascomycetous fungi indicate that pipecolic acid and saccharopine are key intermediates. We have used degenerate primers, Rapid amplification of cDNA ends (RACE)-PCR and inverse PCR to identify the gene sequence of U. oxytropis saccharopine reductase. To investigate the role of this gene product in swainsonine metabolism, we have developed a gene deletion system for this slow-growing endophyte based on our recently established transformation protocol. A strain of U. oxytropis lacking saccharopine reductase had decreased levels of saccharopine and lysine along with increased accumulation of pipecolic acid and swainsonine. Thus, saccharopine reductase influences the accumulation of swainsonine and its precursor, pipecolic acid, in U. oxytropis.Copyright © 2012 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.
[30]
呼吉雅. 小花棘豆Embellisia内生真菌酵母氨酸还原酶基因缺失突变株的构建及筛选鉴定. 呼和浩特: 内蒙古师范大学, 2015.
Hu J Y. Construction and screening of saccharopine reductase gene disruption mutant of Embellisia fungal endophyte from Oxytropis glabra. Hohhot: Inner Mongolia Normal University, 2015.
[31]
Lu H, Quan H Y, Ren Z H, et al. The genome of Undifilum oxytropis provides insights into swainsonine biosynthesis and locoism. Scientific Reports, 2016, 6(1): 30760.
Undifilum oxytropis is a fungal endophyte of locoweeds. It produces swainsonine, which is the principal toxic ingredient of locoweeds. However, the genes, pathways and mechanisms of swainsonine biosynthesis are not known. In this study, the genome of U. oxytropis was firstly sequenced and assembled into a 70.05 megabases (Mb) draft genome, which encoded 11,057 protein-coding genes, and 54% of them were similar to current publicly available sequences. U. oxytropis genes were annotated and 164 putative genes were annotated into enzymes, such as Saccharopine dehydrogenase, Saccharopine oxidase, and Pyrroline-5-carboxylate reductase, hypothesized to be involved in the biosynthesis pathway of swainsonine. The genome sequence and gene annotation of U. oxytropis will provide new insights into functional analyses. The characterization of genes in swainsonine biosynthesis will greatly facilitate locoweed poisoning research and help direct locoism management.
[32]
Gao Q, Jin K, Ying S H, et al. Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum. PLoS Genetics, 2011, 7(1): e1001264.
[33]
Neyaz M, Das S, Cook D, et al. Phylogenetic comparison of swainsonine biosynthetic gene clusters among fungi. Journal of Fungi, 2022, 8(4): 359.
Swainsonine is a cytotoxic alkaloid produced by fungi. Genome sequence analyses revealed that these fungi share an orthologous gene cluster, SWN, necessary for swainsonine biosynthesis. To investigate the SWN cluster, the gene sequences and intergenic regions were assessed in organisms containing swnK, which is conserved across all fungi that produce swainsonine. The orders of fungi which contained orthologous swainsonine genes included Pleosporales, Onygenales, Hypocreales, Chaetothyriales, Xylariales, Capnodiales, Microthyriales, Caliciales, Patellariales, Eurotiales, and a species of the Leotiomycetes. SwnK and swnH2 genes were conserved across all fungi containing the SWN cluster; in contrast, swnT and swnA were found in a limited number of fungi containing the SWN cluster. The phylogenetic data suggest that in some orders that the SWN cluster was gained once from a common ancestor while in other orders it was likely gained several times from one or more common ancestors. The data also show that rearrangements and inversions of the SWN cluster happened within a genus as species diverged. Analysis of the intergenic regions revealed different combinations and inversions of open reading frames, as well as absence of genes. These results provide evidence of a complex evolutionary history of the SWN cluster in fungi.
[34]
凯乐, 卢萍, 姜凯, 等. 真菌苦马豆素合成途径中SWN基因簇的研究进展. 农业灾害研究, 2022, 12(11): 152-154.
Kai L, Lu P, Jiang K, et al. Research progress of SWN gene cluster in the synthetic pathway of swainsonine. Journal of Agricultural Catastrophology, 2022, 12(11): 152-154.
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李金荣. 甘肃波状芽管孢的鉴定及波状芽管孢真菌LAAOKS基因的检测. 银川: 宁夏大学, 2018.
Li J R. Identification of Alternaria Section Undifilum gansuense and detection of LAAO, KS genes in Alternaria Section Undifilum spp. Yinchuan: Ningxia University, 2018.
[36]
王维夫. 内生真菌Alternaria oxytropis OW7.8 swnK基因克隆及功能研究. 呼和浩特: 内蒙古师范大学, 2022.
Wang W F. Cloing and functional research of swnK gene in the endophytic fungus Alternaria oxytropis OW7.8. Hohhot: Inner Mongolia Normal University, 2022.
[37]
Noor A I, Neyaz M, Cook D, et al. Molecular characterization of a fungal ketide synthase gene among swainsonine-producing Alternaria species in the USA. Current Microbiology, 2020, 77(9): 2554-2563.
[38]
Huang E X, Zhang Y, Sun L, et al. Swnk plays an important role in the biosynthesis of swainsonine in Metarhizium anisopliae. Biotechnology Letters, 2023, 45(4): 509-519.
[39]
马秀奇, 张晓娟, 孙晓敏, 等. 甘蓝型油菜P5CR同源基因的克隆表达及其多态性分析. 福建农业学报, 2022, 37(6): 727-733.
Ma X Q, Zhang X J, Sun X M, et al. Cloning, expression, and polymorphism of homologous Brassica napus P5CR. Fujian Journal of Agricultural Sciences, 2022, 37(6): 727-733.
[40]
Selim S, Akhtar N, Hagagy N, et al. Selection of newly identified growth-promoting Archaea Haloferax species with a potential action on cobalt resistance in maize plants. Frontiers in Plant Science, 2022, 13: 872654.
Soil contamination with cobalt (Co) negatively impacts plant growth and production. To combat Co toxicity, plant growth-promoting microorganisms for improving plant growth are effectively applied. To this end, unclassified haloarchaeal species strain NRS_31 (OL912833), belonging to Haloferax genus, was isolated, identified for the first time, and applied to mitigate the Co phytotoxic effects on maize plants. This study found that high Co levels in soil lead to Co accumulation in maize leaves. Co accumulation in the leaves inhibited maize growth and photosynthetic efficiency, inducing oxidative damage in the tissue. Interestingly, pre-inoculation with haloarchaeal species significantly reduced Co uptake and mitigated the Co toxicity. Induced photosynthesis improved sugar metabolism, allocating more carbon to defend against Co stress. Concomitantly, the biosynthetic key enzymes involved in sucrose (sucrose-P-synthase and invertases) and proline (pyrroline-5- carboxylate synthetase (P5CS), pyrroline-5-carboxylate reductase (P5CR)) biosynthesis significantly increased to maintain plant osmotic potential. In addition to their osmoregulation potential, soluble sugars and proline can contribute to maintaining ROS hemostasis. Maize leaves managed their oxidative homeostasis by increasing the production of antioxidant metabolites (such as phenolics and tocopherols) and increasing the activity of ROS-scavenging enzymes (such as POX, CAT, SOD, and enzymes involved in the AsA/GSH cycle). Inside the plant tissue, to overcome heavy Co toxicity, maize plants increased the synthesis of heavy metal-binding ligands (metallothionein, phytochelatins) and the metal detoxifying enzymes (glutathione S transferase). Overall, the improved ROS homeostasis, osmoregulation, and Co detoxification systems were the basis underlying Co oxidative stress, mitigating haloarchaeal treatment's impact.
[41]
Sheteiwy M S, Ali D F I, Xiong Y C, et al. Physiological and biochemical responses of soybean plants inoculated with Arbuscular mycorrhizal fungi and Bradyrhizobium under drought stress. BMC Plant Biology, 2021, 21(1): 195.
The present study aims to study the effects of biofertilizers potential of Arbuscular Mycorrhizal Fungi (AMF) and Bradyrhizobium japonicum (B. japonicum) strains on yield and growth of drought stressed soybean (Giza 111) plants at early pod stage (50 days from sowing, R3) and seed development stage (90 days from sowing, R5).Highest plant biomass, leaf chlorophyll content, nodulation, and grain yield were observed in the unstressed plants as compared with water stressed-plants at R3 and R5 stages. At soil rhizosphere level, AMF and B. japonicum treatments improved bacterial counts and the activities of the enzymes (dehydrogenase and phosphatase) under well-watered and drought stress conditions. Irrespective of the drought effects, AMF and B. japonicum treatments improved the growth and yield of soybean under both drought (restrained irrigation) and adequately-watered conditions as compared with untreated plants. The current study revealed that AMF and B. japonicum improved catalase (CAT) and peroxidase (POD) in the seeds, and a reverse trend was observed in case of malonaldehyde (MDA) and proline under drought stress. The relative expression of the CAT and POD genes was up-regulated by the application of biofertilizers treatments under drought stress condition. Interestingly a reverse trend was observed in the case of the relative expression of the genes involved in the proline metabolism such as P5CS, P5CR, PDH, and P5CDH under the same conditions. The present study suggests that biofertilizers diminished the inhibitory effect of drought stress on cell development and resulted in a shorter time for DNA accumulation and the cycle of cell division. There were notable changes in the activities of enzymes involved in the secondary metabolism and expression levels of GmSPS1, GmSuSy, and GmC-INV in the plants treated with biofertilizers and exposed to the drought stress at both R3 and R5 stages. These changes in the activities of secondary metabolism and their transcriptional levels caused by biofertilizers may contribute to increasing soybean tolerance to drought stress.The results of this study suggest that application of biofertilizers to soybean plants is a promising approach to alleviate drought stress effects on growth performance of soybean plants. The integrated application of biofertilizers may help to obtain improved resilience of the agro ecosystems to adverse impacts of climate change and help to improve soil fertility and plant growth under drought stress.
[42]
Fujii T, Narita T, Agematu H, et al. Characterization of L-lysine 6-aminotransferase and its structural gene from Flavobacterium lutescens IFO3084. The Journal of Biochemistry, 2000, 128(3): 391-397.
[43]
Fujii T, Mukaihara M, Agematu H, et al. Biotransformation of L-lysine to L-pipecolic acid catalyzed by L-lysine 6-aminotransferase and pyrroline-5-carboxylate reductase. Bioscience, Biotechnology, and Biochemistry, 2002, 66(3): 622-627.
The enzyme involved in the reduction of delta1-piperideine-6-carboxylate (P6C) to L-pipecolic acid (L-PA) has never been identified. We found that Escherichia coli JM109 transformed with the lat gene encoding L-lysine 6-aminotransferase (LAT) converted L-lysine (L-Lys) to L-PA. This suggested that there is a gene encoding "P6C reductase" that catalyzes the reduction of P6C to L-PA in the genome of E. coli. The complementation experiment of proC32 in E. coli RK4904 for L-PA production clearly shows that the expression of both lat and proC is essential for the biotransformation of L-Lys to L-PA. Further, We showed that both LAT and pyrroline-5-carboxylate (P5C) reductase, the product of proC, were needed to convert L-Lys to L-PA in vitro. These results demonstrate that P5C reductase catalyzes the reduction of P6C to L-PA. Biotransformation of L-Lys to L-PA using lat-expressing E. coli BL21 was done and L-PA was accumulated in the medium to reach at an amount of 3.9 g/l after 159 h of cultivation. It is noteworthy that the ee-value of the produced pipecolic acid was 100%.
[44]
Zhang L, Wu R L, Mur L A J, et al. Assembly of high-quality genomes of the locoweed Oxytropis ochrocephala and its endophyte Alternaria oxytropis provides new evidence for their symbiotic relationship and swainsonine biosynthesis. Molecular Ecology Resources, 2023, 23(1): 253-272.
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Li Z, Xu X, Huang Y, et al. Swainsonine activates mitochondria-mediated apoptotic pathway in human lung cancer A 549 cells and retards the growth of lung cancer xenografts. International Journal of Biological Sciences, 2012, 8(3): 394-405.
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Lee Z Y, Loo J S E, Wibowo A, et al. Targeting cancer via golgi α-mannosidase II inhibition: how far have we come in developing effective inhibitors. Carbohydrate Research, 2021, 508: 108395.
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Shi S L, Gu S Q, Han T, et al. Inhibition of MAN2A1 enhances the immune response to anti-PD-L1 in human tumors. Clinical Cancer Research, 2020, 26(22): 5990-6002.
Immune checkpoint blockade has shown remarkable efficacy, but in only a minority of patients with cancer, suggesting the need to develop additional treatment strategies. Aberrant glycosylation in tumors, resulting from the dysregulated expression of key enzymes in glycan biosynthesis, modulates the immune response. However, the role of glycan biosynthesis enzymes in antitumor immunity is poorly understood. We aimed to study the immunomodulatory effects of these enzymes.
[48]
Fu K Y, Chen X, Shou N, et al. Swainsonine induces liver inflammation in mice via disturbance of gut microbiota and bile acid metabolism. Journal of Agricultural and Food Chemistry, 2023, 71(3): 1758-1767.
Swainsonine induced liver inflammation in livestock; however, the underlying mechanisms, especially the role of bile acids (BAs), in the pathogenesis remained elusive. Here, our results showed that swainsonine induced hepatic inflammation via changing BA metabolism and gut microbiota in mice. Swainsonine significantly upregulated the levels of deoxycholic acid (DCA) and taurine-β-muricholic acid (T-β-MCA) in the serum and liver of mice due to the markedly increased genus and the decreased genus in the gut. As antagonists of the farnesoid X receptor (FXR), elevated DCA and T-β-MCA inhibited hepatic gene expression and thus suppressed FXR-SHP signaling and activated hepatic gene expression, which induced a significant upregulation of the total BA level in serum, contributing to liver inflammation. These findings offer new insights into the underlying mechanisms in which swainsonine induced liver inflammation in mice via the gut-liver axis and suggest that gut microbiota and its metabolite BAs may be underlying triggering factors.
[49]
Wu C C, Han T S, Lu H, et al. The toxicology mechanism of endophytic fungus and swainsonine in locoweed. Environmental Toxicology and Pharmacology, 2016, 47: 38-46.
Locoweed is a perennial herbaceous plant included in Astragalus spp. and Oxytropis spp. that contains the toxic indolizidine alkaloid swainsonine. The livestock that consume locoweed can suffer from a type of toxicity called locoism. There are aliphaticnitro compounds, selenium, selenium compounds, and alkaloids in locoweed. The toxic component in locoweed has been identified as swainsonine, an indolizidine alkaloid. Swainsonine inhibits lysosomal a-mannosidase and mannosidase II, resulting in altered oligosaccharide degradation and incomplete glycoprotein processing. Corresponding studies on endophytic fungi producing swainsonine have been isolated from a variety of locoweed, and these endophytic fungi and locoweed have a close relationship. Endophytic fungi can promote the growth of locoweed and increase swainsonine production. As a result, livestock that consume locoweed exhibit several symptoms, including dispirited behavior, staggering gait, chromatopsia, trembling, ataxia, and cellular vacuolar degeneration of most tissues by pathological observation. Locoism results in significant annual economic losses. Therefore, in this paper, we review the current research on locoweed, including that on locoweed species distribution in China, endophyte fungus in locoweed, the toxicology mechanism of locoweed, and the swainsonine effect on reproduction.Copyright © 2016. Published by Elsevier B.V.
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Luo F, Tang G, Hong S, et al. Promotion of Arabidopsis immune responses by a rhizosphere fungus via supply of pipecolic acid to plants and selective augment of phytoalexins. Science China Life Sciences, 2023, 66(5): 1119-1133.
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Magot F, Van Soen G, Buedenbender L, et al. Bioactivity and metabolome mining of deep-sea sediment-derived microorganisms reveal new hybrid PKS-NRPS macrolactone from Aspergillus versicolor PS108-62. Marine Drugs, 2023, 21(2): 95.
Despite low temperatures, poor nutrient levels and high pressure, microorganisms thrive in deep-sea environments of polar regions. The adaptability to such extreme environments renders deep-sea microorganisms an encouraging source of novel, bioactive secondary metabolites. In this study, we isolated 77 microorganisms collected by a remotely operated vehicle from the seafloor in the Fram Strait, Arctic Ocean (depth of 2454 m). Thirty-two bacteria and six fungal strains that represented the phylogenetic diversity of the isolates were cultured using an One-Strain-Many-Compounds (OSMAC) approach. The crude EtOAc extracts were tested for antimicrobial and anticancer activities. While antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA) and Enterococcus faecium was common for many isolates, only two bacteria displayed anticancer activity, and two fungi inhibited the pathogenic yeast Candida albicans. Due to bioactivity against C. albicans and rich chemical diversity based on molecular network-based untargeted metabolomics, Aspergillus versicolor PS108-62 was selected for an in-depth chemical investigation. A chemical work-up of the SPE-fractions of its dichloromethane subextract led to the isolation of a new PKS-NRPS hybrid macrolactone, versicolide A (1), a new quinazoline (−)-isoversicomide A (3), as well as three known compounds, burnettramic acid A (2), cyclopenol (4) and cyclopenin (5). Their structures were elucidated by a combination of HRMS, NMR, [α]D, FT-IR spectroscopy and computational approaches. Due to the low amounts obtained, only compounds 2 and 4 could be tested for bioactivity, with 2 inhibiting the growth of C. albicans (IC50 7.2 µg/mL). These findings highlight, on the one hand, the vast potential of the genus Aspergillus to produce novel chemistry, particularly from underexplored ecological niches such as the Arctic deep sea, and on the other, the importance of untargeted metabolomics for selection of marine extracts for downstream chemical investigations.
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Wang Y, Li Y N, Qu X L, et al. The research progress on genetic transformation system and screening techniques of filamentous fungi. Forest By-product and Speciality in China, 2020, 169(6): 69-75.
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An available whole genome sequence for Aspergillus flavus provides the opportunity to characterize factors involved in pathogenicity and to elucidate the regulatory networks involved in aflatoxin biosynthesis. Functional analysis of genes within the genome is greatly facilitated by the ability to disrupt or mis-express target genes and then evaluate their result on the phenotype of the fungus. Large-scale functional analysis requires an efficient genetic transformation system and the ability to readily select transformants with altered expression, and usually requires generation of double (or multi) gene deletion strains or the use of prototrophic strains. However, dominant selectable markers, an efficient transformation system and an efficient screening system for transformants in A. flavus are absent.
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Yu K, Xue J Q, Wang J K, et al. Research progress on application of CRISPR/Cas 9 gene editing technique in filamentous fungi. Current Biotechnology, 2022, 12(5): 696-704.
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毛彦妮, 余永涛, 赵清梅, 等. 产苦马豆素疯草内生真菌实时荧光定量PCR检测方法的建立. 中国草地学报, 2021, 43(1): 8-17.
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[59]
Zhang J, Hansen L G, Gudich O, et al. A microbial supply chain for production of the anti-cancer drug vinblastine. Nature, 2022, 609(7926): 341-347.
Monoterpene indole alkaloids (MIAs) are a diverse family of complex plant secondary metabolites with many medicinal properties, including the essential anti-cancer therapeutics vinblastine and vincristine1. As MIAs are difficult to chemically synthesize, the world’s supply chain for vinblastine relies on low-yielding extraction and purification of the precursors vindoline and catharanthine from the plant Catharanthus roseus, which is then followed by simple in vitro chemical coupling and reduction to form vinblastine at an industrial scale2,3. Here, we demonstrate the de novo microbial biosynthesis of vindoline and catharanthine using a highly engineered yeast, and in vitro chemical coupling to vinblastine. The study showcases a very long biosynthetic pathway refactored into a microbial cell factory, including 30 enzymatic steps beyond the yeast native metabolites geranyl pyrophosphate and tryptophan to catharanthine and vindoline. In total, 56 genetic edits were performed, including expression of 34 heterologous genes from plants, as well as deletions, knock-downs and overexpression of ten yeast genes to improve precursor supplies towards de novo production of catharanthine and vindoline, from which semisynthesis to vinblastine occurs. As the vinblastine pathway is one of the longest MIA biosynthetic pathways, this study positions yeast as a scalable platform to produce more than 3,000 natural MIAs and a virtually infinite number of new-to-nature analogues.

基金

*国家自然科学基金(31960130)
内蒙古自然科学基金(2022MS03014)

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