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WIND转录因子在植物响应伤口胁迫和器官生长发育中的研究进展* |
侯思佳,张倩倩,孙振美,陈静,孟剑桥,梁丹,邬荣领,郭允倩**() |
北京林业大学生物科学与技术学院 计算生物学中心 北京 100083 |
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Research Progress of WIND Transcription Factor Responsing to Wound Stress and Organ Growth in Plants |
HOU Si-jia,ZHANG Qian-qian,SUN Zhen-mei,CHEN Jing,MENG Jian-qiao,LIANG Dan,WU Rong-ling,GUO Yun-qian**() |
College of Biological Science and Technology, Beijing Forestry University, Center for Computational Biology, Beijing 100083, China |
引用本文:
侯思佳,张倩倩,孙振美,陈静,孟剑桥,梁丹,邬荣领,郭允倩. WIND转录因子在植物响应伤口胁迫和器官生长发育中的研究进展*[J]. 中国生物工程杂志, 2022, 42(4): 85-92.
HOU Si-jia,ZHANG Qian-qian,SUN Zhen-mei,CHEN Jing,MENG Jian-qiao,LIANG Dan,WU Rong-ling,GUO Yun-qian. Research Progress of WIND Transcription Factor Responsing to Wound Stress and Organ Growth in Plants. China Biotechnology, 2022, 42(4): 85-92.
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[1] |
Ikeuchi M, Ogawa Y, Iwase A, et al. Plant regeneration: cellular origins and molecular mechanisms. Development (Cambridge, England), 2016, 143(9): 1442-1451.
doi: 10.1242/dev.134668
|
[2] |
Thorpe T A. History of plant tissue culture. Molecular Biotechnology, 2007, 37(2): 169-180.
doi: 10.1007/s12033-007-0031-3
|
[3] |
Birnbaum K D, Alvarado A S. Slicing across kingdoms: regeneration in plants and animals. Cell, 2008, 132(4): 697-710.
doi: 10.1016/j.cell.2008.01.040
pmid: 18295584
|
[4] |
Tanaka E M, Reddien P W. The cellular basis for animal regeneration. Developmental Cell, 2011, 21(1): 172-185.
doi: 10.1016/j.devcel.2011.06.016
pmid: 21763617
|
[5] |
Skoog F, Miller C O. Chemical regulation of growth and organ formation in plant tissues cultured in vitro. Symposia of the Society for Experimental Biology, 1957, 11: 118-130.
|
[6] |
Valvekens D, van Montagu M, van Lijsebettens M.Agrobacterium tumefaciens-mediated transformation of Arabidopsis thaliana root explants by using kanamycin selection. Proceedings of the National Academy of Sciences of the United States of America, 1988, 85(15): 5536-5540.
|
[7] |
Che P, Lall S, Howell S H. Developmental steps in acquiring competence for shoot development in Arabidopsis tissue culture. Planta, 2007, 226(5): 1183-1194.
doi: 10.1007/s00425-007-0565-4
|
[8] |
Atta R, Laurens L, Boucheron-Dubuisson E, et al. Pluripotency of Arabidopsis xylem pericycle underlies shoot regeneration from root and hypocotyl explants grown in vitro. The Plant Journal: for Cell and Molecular Biology, 2009, 57(4): 626-644.
doi: 10.1111/j.1365-313X.2008.03715.x
|
[9] |
Sugimoto K, Jiao Y L, Meyerowitz E M. Arabidopsis regeneration from multiple tissues occurs via a root development pathway. Developmental Cell, 2010, 18(3): 463-471.
doi: 10.1016/j.devcel.2010.02.004
pmid: 20230752
|
[10] |
张麒, 陈静, 李俐, 等. 植物AP2/ERF转录因子家族的研究进展. 生物技术通报, 2018, 34(8): 1-7.
doi: 10.13560/j.cnki.biotech.bull.1985.2017-1142
|
|
Zhang Q, Chen J, Li L, et al. Research progress on plant AP2/ERF transcription factor family. Biotechnology Bulletin, 2018, 34(8): 1-7.
doi: 10.13560/j.cnki.biotech.bull.1985.2017-1142
|
[11] |
孙滨, 占小登, 曹立勇, 等. 水稻AP2/ERF转录因子的研究进展. 农业生物技术学报, 2017, 25(11): 1860-1869.
|
|
Sun B, Zhan X D, Cao L Y, et al. Research progress of AP2/ERF transcription factor in rice(Oryza sativa). Journal of Agricultural Biotechnology, 2017, 25(11): 1860-1869.
|
[12] |
赵金玲, 姚文静, 王升级, 等. 杨树AP2/ERF转录因子家族生物信息学分析. 东北林业大学学报, 2015, 43(10): 21-29.
|
|
Zhao J L, Yao W J, Wang S J, et al. AP2/ERF gene family in Populus trichocarpa by bioinformatics. Journal of Northeast Forestry University, 2015, 43(10): 21-29.
|
[13] |
Sakuma Y, Liu Q, Dubouzet J G, et al. DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression. Biochemical and Biophysical Research Communications, 2002, 290(3): 998-1009.
pmid: 11798174
|
[14] |
Heyman J, Canher B, Bisht A, et al. Emerging role of the plant ERF transcription factors in coordinating wound defense responses and repair. Journal of Cell Science, 2018, 131(2): jcs208215.
|
[15] |
Rashid M, He G Y, Yang G X, et al. AP2/ERF transcription factor in rice: genome-wide canvas and syntenic relationships between monocots and eudicots. Evolutionary Bioinformatics Online, 2012, 8: 321-355.
|
[16] |
Elliott R C, Betzner A S, Huttner E, et al. AINTEGUMENTA, an APETALA2-like gene of Arabidopsis with pleiotropic roles in ovule development and floral organ growth. The Plant Cell, 1996, 8(2): 155-168.
|
[17] |
Boutilier K, Offringa R, Sharma V K, et al. Ectopic expression of BABY BOOM triggers a conversion from vegetative to embryonic growth. The Plant Cell, 2002, 14(8): 1737-1749.
doi: 10.1105/tpc.001941
|
[18] |
Yamaguchi-Shinozaki K, Shinozaki K. A novel Cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress. The Plant Cell, 1994, 6(2): 251-264.
|
[19] |
Thomashow M F. PLANT COLD ACCLIMATION: freezing tolerance genes and regulatory mechanisms. Annual Review of Plant Physiology and Plant Molecular Biology, 1999, 50: 571-599.
pmid: 15012220
|
[20] |
Hao D Y, Ohme-Takagi M, Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. Journal of Biological Chemistry, 1998, 273(41): 26857-26861.
doi: 10.1074/jbc.273.41.26857
pmid: 9756931
|
[21] |
Alonso J M, Stepanova A N, Leisse T J, et al. Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science, 2003, 301(5633): 653-657.
pmid: 12893945
|
[22] |
HU Y X, WANG Y H, LIU X F, et al. Arabidopsis RAV 1 is down-regulated by brassinosteroid and may act as a negative regulator during plant development. Cell Research, 2004, 14 (1): 8-15.
doi: 10.1038/sj.cr.7290197
|
[23] |
Sohn K H, Lee S C, Jung H W, et al. Expression and functional roles of the pepper pathogen-induced transcription factor RAV 1 in bacterial disease resistance, and drought and salt stress tolerance. Plant Molecular Biology, 2006, 61(6): 897-915.
doi: 10.1007/s11103-006-0057-0
|
[24] |
Lin R C, Park H J, Wang H Y. Role of Arabidopsis RAP2.4 in regulating light- and ethylene-mediated developmental processes and drought stress tolerance. Molecular Plant, 2008, 1(1): 42-57.
doi: 10.1093/mp/ssm004
|
[25] |
Okamuro J K, Caster B, Villarroel R, et al. The AP2 domain of APETALA2 defines a large new family of DNA binding proteins in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America, 1997, 94(13): 7076-7081.
|
[26] |
Iwase A, Ohme-Takagi M, Sugimoto K. WIND1: a key molecular switch for plant cell dedifferentiation. Plant Signaling & Behavior, 2011, 6(12): 1943-1945.
|
[27] |
Iwase A, Harashima H, Ikeuchi M, et al. WIND 1 promotes shoot regeneration through transcriptional activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis. The Plant Cell, 2017, 29(1): 54-69.
doi: 10.1105/tpc.16.00623
|
[28] |
Zhou C, Guo J S, Feng Z H, et al. Molecular characterization of a novel AP 2 transcription factor ThWIND1-L from Thellungiella halophila. Plant Cell, Tissue and Organ Culture (PCTOC), 2012, 110(3): 423-433.
doi: 10.1007/s11240-012-0163-4
|
[29] |
Iwase A, Mitsuda N, Koyama T, et al. The AP2/ERF transcription factor WIND 1 controls cell dedifferentiation in Arabidopsis. Current Biology, 2011, 21(6): 508-514.
doi: 10.1016/j.cub.2011.02.020
|
[30] |
Müller B, Sheen J. Cytokinin and auxin interaction in root stem-cell specification during early embryogenesis. Nature, 2008, 453 (7198): 1094-1097.
doi: 10.1038/nature06943
|
[31] |
Sheng L H, Hu X M, Du Y J, et al. Non-canonical WOX11-mediated root branching contributes to plasticity in Arabidopsis root system architecture. Development (Cambridge, England), 2017, 144(17): 3126-3133.
|
[32] |
Liu J C, Sheng L H, Xu Y Q, et al. WOX11 and 12 are involved in the first-step cell fate transition during de novo root organogenesis in Arabidopsis. The Plant Cell, 2014, 26(3): 1081-1093.
doi: 10.1105/tpc.114.122887
|
[33] |
Iwase A, Mita K, Nonaka S, et al. WIND1-based acquisition of regeneration competency in Arabidopsis and rapeseed. Journal of Plant Research, 2015, 128(3): 389-397.
doi: 10.1007/s10265-015-0714-y
|
[34] |
Ikeuchi M, Iwase A, Rymen B, et al. PRC 2 represses dedifferentiation of mature somatic cells in Arabidopsis. Nature Plants, 2015, 1(7): 15089.
doi: 10.1038/nplants.2015.89
|
[35] |
Bouyer D, Roudier F, Heese M, et al. Polycomb repressive complex 2 controls the embryo-to-seedling phase transition[J]PLoS Genet, 2011, 7(3): e1002014.
doi: 10.1371/journal.pgen.1002014
|
[36] |
Druege U, Franken P, Hajirezaei M R. Plant hormone homeostasis, signaling, and function during adventitious root formation in cuttings. Frontiers in Plant Science, 2016, 7: 381.
doi: 10.3389/fpls.2016.00381
pmid: 27064322
|
[37] |
Ahkami A H, Lischewski S, Haensch K T, et al. Molecular physiology of adventitious root formation in Petunia hybrida cuttings: involvement of wound response and primary metabolism. The New Phytologist, 2009, 181(3): 613-625.
doi: 10.1111/j.1469-8137.2008.02704.x
|
[38] |
Iwase A, Ishii H, Aoyagi H, et al. Comparative analyses of the gene expression profiles of Arabidopsis intact plant and cultured cells. Biotechnology Letters, 2005, 27(15): 1097-1103.
doi: 10.1007/s10529-005-8456-x
|
[39] |
Iwase A, Mitsuda N, Ikeuchi M, et al. Arabidopsis WIND 1 induces callus formation in rapeseed, tomato, and tobacco. Plant Signaling & Behavior, 2013, 8(12): e27432.
|
[40] |
Stappenbeck T S, Miyoshi H. The role of stromal stem cells in tissue regeneration and wound repair. Science, 2009, 324(5935): 1666-1669.
doi: 10.1126/science.1172687
pmid: 19556498
|
[41] |
Ikeuchi M, Iwase A, Rymen B, et al. Wounding triggers callus formation via dynamic hormonal and transcriptional changes. Plant Physiology, 2017, 175(3): 1158-1174.
doi: 10.1104/pp.17.01035
pmid: 28904073
|
[42] |
Ozawa S, Yasutani I, Fukuda H, et al. Organogenic responses in tissue culture of srd mutants of Arabidopsis thaliana. Development (Cambridge, England), 1998, 125(1): 135-142.
doi: 10.1242/dev.125.1.135
|
[43] |
Che P, Gingerich D J, Lall S, et al. Global and hormone-induced gene expression changes during shoot development in Arabidopsis. The Plant Cell, 2002, 14(11): 2771-2785.
doi: 10.1105/tpc.006668
|
[44] |
Gallois J L, Nora F R, Mizukami Y, et al. WUSCHEL induces shoot stem cell activity and developmental plasticity in the root meristem. Genes & Development, 2004, 18(4): 375-380.
doi: 10.1101/gad.291204
|
[45] |
Gordon S P, Heisler M G, Reddy G V, et al. Pattern formation during de novo assembly of the Arabidopsis shoot meristem. Development (Cambridge, England), 2007, 134(19): 3539-3548.
doi: 10.1242/dev.010298
|
[46] |
Meng W J, Cheng Z J, Sang Y L, et al. Type-B Arabidopsis RESPONSE REGULATORs specify the shoot stem cell niche by dual regulation of WUSCHEL. The Plant Cell, 2017, 29(6): 1357-1372.
doi: 10.1105/tpc.16.00640
|
[47] |
Wang J, Tian C H, Zhang C, et al. Cytokinin signaling activates WUSCHEL expression during axillary meristem initiation. The Plant Cell, 2017, 29(6): 1373-1387.
doi: 10.1105/tpc.16.00579
pmid: 28576845
|
[48] |
Zhang T Q, Lian H, Zhou C M, et al. A two-step model for de novo activation of WUSCHEL during plant shoot regeneration. The Plant Cell, 2017, 29(5): 1073-1087.
doi: 10.1105/tpc.16.00863
|
[49] |
Zubo Y O, Blakley I C, Yamburenko M V, et al. Cytokinin induces genome-wide binding of the type-B response regulator ARR10 to regulate growth and development in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America, 2017, 114(29): E5995-E6004.
|
[50] |
Che P, Lall S, Nettleton D, et al. Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture. Plant Physiology, 2006, 141(2): 620-637.
doi: 10.1104/pp.106.081240
|
[51] |
Banno H, Ikeda Y, Niu Q W, et al. Overexpression of Arabidopsis ESR1 induces initiation of shoot regeneration. The Plant Cell, 2001, 13(12): 2609-2618.
doi: 10.1105/tpc.010234
|
[52] |
Kirch T, Simon R, Grünewald M, et al. The DORNROSCHEN/ENHANCER OF SHOOT REGENERATION1 gene of Arabidopsis acts in the control of meristem ccll fate and lateral organ development. The Plant Cell, 2003, 15(3): 694-705.
doi: 10.1105/tpc.009480
|
[53] |
Matsuo N, Makino M, Banno H. Arabidopsis enhancer of shoot regeneration (esr)1 and esr2 regulate in vitro shoot regeneration and their expressions are differentially regulated. Plant Science, 2011, 181(1): 39-46.
doi: 10.1016/j.plantsci.2011.03.007
pmid: 21600396
|
[54] |
Chatfield S P, Capron R, Severino A, et al. Incipient stem cell niche conversion in tissue culture: using a systems approach to probe early events in WUSCHEL-dependent conversion of lateral root primordia into shoot meristems. The Plant Journal: for Cell and Molecular Biology, 2013, 73(5): 798-813.
doi: 10.1111/tpj.12085
|
[55] |
Cheng Z J, Wang L, Sun W, et al. Pattern of auxin and cytokinin responses for shoot meristem induction results from the regulation of cytokinin biosynthesis by AUXIN RESPONSE FACTOR3. Plant Physiology, 2013, 161(1): 240-251.
doi: 10.1104/pp.112.203166
pmid: 23124326
|
[56] |
Efroni I, Mello A, Nawy T, et al. Root regeneration triggers an embryo-like sequence guided by hormonal interactions. Cell, 2016, 165(7): 1721-1733.
doi: S0092-8674(16)30491-3
pmid: 27212234
|
[57] |
Heyman J, Cools T, Canher B, et al. The heterodimeric transcription factor complex ERF115-PAT 1 grants regeneration competence. Nature Plants, 2016, 2: 16165.
doi: 10.1038/nplants.2016.165
pmid: 27797356
|
[58] |
Ledwoń A, Gaj M D. LEAFY COTYLEDON2 gene expression and auxin treatment in relation to embryogenic capacity of Arabidopsis somatic cells. Plant Cell Reports, 2009, 28(11): 1677-1688.
doi: 10.1007/s00299-009-0767-2
|
[59] |
Ikeuchi M, Iwase A, Sugimoto K. Control of plant cell differentiation by histone modification and DNA methylation. Current Opinion in Plant Biology, 2015, 28: 60-67.
doi: 10.1016/j.pbi.2015.09.004
pmid: 26454697
|
[60] |
Holec S, Berger F. Polycomb group complexes mediate developmental transitions in plants. Plant Physiology, 2011, 158(1): 35-43.
doi: 10.1104/pp.111.186445
|
[61] |
He C S, Chen X F, Huang H, et al. Reprogramming of H3K27me 3 is critical for acquisition of pluripotency from cultured Arabidopsis tissues. PLoS Genetics, 2012, 8(8): e1002911.
doi: 10.1371/journal.pgen.1002911
|
[62] |
Bellini C, Pacurar D I, Perrone I. Adventitious roots and lateral roots: similarities and differences. Annual Review of Plant Biology, 2014, 65: 639-666.
doi: 10.1146/annurev-arplant-050213-035645
|
[63] |
Verstraeten I, Schotte S, Geelen D. Hypocotyl adventitious root organogenesis differs from lateral root development. Frontiers in Plant Science, 2014, 5: 495.
doi: 10.3389/fpls.2014.00495
pmid: 25324849
|
[64] |
Pacurar D I, Pacurar M L, Lakehal A, et al. The Arabidopsis Cop 9 signalosome subunit 4 (CSN4) is involved in adventitious root formation. Scientific Reports, 2017, 7: 628.
doi: 10.1038/s41598-017-00744-1
pmid: 28377589
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