综述 |
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光遗传学技术研究进展 * |
郭轩彤1,张春波2,**() |
1 南昌大学玛丽女王学院 南昌 330031 2 南昌大学药学院 南昌 330031 |
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Research Progress of Optogenetic Techniques |
Xuan-tong GUO1,Chun-bo ZHANG2,**() |
1 Nanchang Joint Programme, Queen Mary University of London, Nanchang 330031, China 2 School of Pharmacy, Nanchang University, Nanchang 330031, China |
[1] |
Editorial. Method of the year 2010 optogenetics. Nature Methods, 2011,8(1):1.
doi: 10.1038/nmeth.f.321
|
[2] |
Deisseroth K, Feng G, Majewska A K , et al. Next-generation optical technologies for illuminating genetically targeted brain circuits. Journal of Neuroscience, 2006,26(41):10380-10386.
doi: 10.1523/JNEUROSCI.3863-06.2006
|
[3] |
Oesterhelt D, Stoeckenius W . Rhodopsin-like protein from the purple membrane of Halobaterium halobium. Nature New Biology, 1971,233:149-152.
|
[4] |
Boyden E S, Zhang F, Deisseroth K , et al. Millisecond-timescale, genetically targeted optical control of neural activity. Nature Neuroscience, 2005,8(9):1263-1268.
doi: 10.1038/nn1525
pmid: 16116447
|
[5] |
Chen Y, Xiong M, Zhang S C . Illuminating Parkinson’s therapy with optogenetics. Nature Biotechnology, 2015,33(2):149-150.
doi: 10.1038/nbt.3140
pmid: 4339091
|
[6] |
Bentley J N, Chestek C, Patil P G , et al. Optogenetics in epilepsy. Neurosurgical Focus, 2013,34(6):E4.
|
[7] |
Crick F . The impact of molecular biology on neuroscience. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 1999,354(1392):2021-2025.
doi: 10.1098/rstb.1999.0541
pmid: 10670022
|
[8] |
Matsuno-Yagi A, Mukohata Y . Two possible roles of bacteriorhodopsin; a comparative study of strains of Halobacterium halobium differing in pigmentation. Biochemical and Biophysical Research Communications, 1977,78(1):237-243.
doi: 10.1016/0006-291X(77)91245-1
|
[9] |
Nagel G, Ollig D, Fuhrmann M , et al. Channelrhodopsin-1:a light-gated proton channel in green algae. Science, 2002,296(5577):2395-2398.
doi: 10.1126/science.1072068
pmid: 12089443
|
[10] |
Guru A, Post R J, Warden M R , et al. Making sense of optogenetics. International Journal of Neuropsychopharmacology, 2015, 18(11): pyv079.
|
[11] |
Zemelman B V, Lee G A, Miesenböck G , et al. Selective photostimulation of genetically chARGed neurons. Neuron, 2002,33(1):15-22.
doi: 10.1016/S0896-6273(01)00574-8
pmid: 11779476
|
[12] |
Lima S Q , Miesenbö ck G. Remote control of behavior through genetically targeted photostimulation of neurons. Cell, 2005,121(1):141-152.
doi: 10.1016/j.cell.2005.02.004
pmid: 15820685122
|
[13] |
Zemelman B V, Nesnas N, Miesenbock G , et al. Photochemical gating of heterologous ion channels: remote control over genetically designated populations of neurons. Proceedings of the National Academy of Sciences, 2003,100(3):1352-1357.
doi: 10.1073/pnas.242738899
|
[14] |
Matthew B, Katharine B, Dirk T , et al. Light-activated ion channels for remote control of neuronal firing. Nature Neuroscience, 2004,7(12):1381-1386.
doi: 10.1038/nn1356
pmid: 2788493
|
[15] |
Aravanis A M, Wang L-P, Deisseroth K , et al. An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology. Journal of Neural Engineering, 2007,4(3):S143-S156.
doi: 10.1088/1741-2560/4/3/S02
pmid: 17873414
|
[16] |
Adamantidis A R, Zhang F, Deisseroth K , et al. Neural substrates of awakening probed with optogenetic control of hypocretin neurons. Nature, 2007,450(7168):420-424.
doi: 10.1038/nature06310
pmid: 17943086
|
[17] |
Oesterhelt D, Stoeckenius W . Functions of a new photoreceptor membrane. Proceedings of the National Academy of Sciences, 1973,70(10):2853-2857.
doi: 10.1073/pnas.70.10.2853
pmid: 4517939
|
[18] |
Nagel G, Szellas T, Bamberg E , et al. Channelrhodopsin-2, a directly light-gated cation-selective membrane channel. Proceedings of the National Academy of Sciences, 2003,100(24):13940-13945.
doi: 10.1073/pnas.1936192100
pmid: 14615590
|
[19] |
Lin J Y, Lin M Z, Tsien R Y , et al. Characterization of engineered channelrhodopsin variants with improved properties and kinetics. Biophysical Journal, 2009,96(5):1803-1814.
doi: 10.1016/j.bpj.2008.11.034
|
[20] |
Gunaydin L A, Yizhar O, Hegemann P , et al. Ultrafast optogenetic control. Nature Neuroscience, 2010,13(3):387-392.
doi: 10.1038/nn.2495
|
[21] |
Kim C K, Adhikari A, Deisseroth K . Integration of optogenetics with complementary methodologies in systems neuroscience. Nature Reviews Neuroscience, 2017,18(4):222-235.
doi: 10.1038/nrn.2017.15
pmid: 28303019
|
[22] |
Berndt A, Yizhar O, Deisseroth K , et al. Bi-stable neural state switches. Nature Neuroscience, 2009,12(2):229-234.
doi: 10.1038/nn.2247
pmid: 19079251
|
[23] |
Bamann C, Gueta R, Bamberg E , et al. Structural guidance of the photocycle of channelrhodopsin-2 by an interhelical hydrogen bond. Biochemistry, 2010,49(2):267-278.
doi: 10.1021/bi901634p
|
[24] |
Fenno L, Yizhar O, Deisseroth K . The development and application of optogenetics. Annual Review of Neuroscience, 2011,34(1):389-412.
doi: 10.1146/annurev-neuro-061010-113817
|
[25] |
Zhang F, Prigge M, Deisseroth K , et al. Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri. Nature Neuroscience, 2008,11(6):631-633.
doi: 10.1038/nn.2120
pmid: 2692303
|
[26] |
Lin J Y, Knutsen P M, Tsien R Y , et al. ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation. Nature Neuroscience, 2013,16(10):1499-1508.
doi: 10.1038/nn.3502
pmid: 23995068
|
[27] |
Klapoetke N C, Murata Y, Boyden E S , et al. Independent optical excitation of distinct neural populations. Nature Methods, 2014,11(3):338-346.
doi: 10.1038/nmeth.2836
pmid: 25317449
|
[28] |
Han X, Boyden E S . Multiple-color optical activation, silencing, and desynchronization of neural activity, with single-spike temporal resolution. PLoS ONE, 2007,2(3):e299.
doi: 10.1371/journal.pone.0000299
pmid: 17375185
|
[29] |
Gradinaru V, Thompson K R , Deisseroth K. eNpHR: a natronomonas halorhodopsin enhanced for optogenetic applications. Brain Cell Biology, 2008,36(1-4):129-139.
doi: 10.1007/s11068-008-9027-6
pmid: 18677566
|
[30] |
Ferenczi E, Deisseroth K . When the electricity (and the lights) go out: Transient changes in excitability. Nature Neuroscience, 2012,15(8):1058-1060.
doi: 10.1038/nn.3172
|
[31] |
Chow B Y, Han X, Boyden E S , et al. High-performance genetically targetable optical neural silencing by light-driven proton pumps. Nature, 2010,463(7277):98-102.
doi: 10.1038/nature08652
|
[32] |
Gradinaru V, Zhang F, Deisseroth K , et al. Molecular and cellular approaches for diversifying and extending optogenetics. Cell, 2010,141(1):154-165.
doi: 10.1016/j.cell.2010.02.037
|
[33] |
Han X, Chow B Y, Boyden E S , et al. A high-light sensitivity optical neural silencer: development and application to optogenetic control of non-human primate cortex. Frontiers in Systems Neuroscience, 2011,5:18.
|
[34] |
Chuong A S, Miri M L, Boyden E S , et al. Noninvasive optical inhibition with a red-shifted microbial rhodopsin. Nature Neuroscience, 2014,17(8):1123-1129.
doi: 10.1038/nn.3752
|
[35] |
Kato H E , Zhang , Nureki O , et al. Crystal structure of the channel rhodopsin light-gated cation channel. Nature, 2012,482(7385):369-374.
doi: 10.1038/nature10870
|
[36] |
Berndt A, Lee S Y, Deisseroth K , et al. Structural foundations of optogenetics: Determinants of channel rhodopsin ion selectivity. Proceedings of the National Academy of Sciences, 2016,113(4):822-829.
doi: 10.1073/pnas.1523341113
pmid: 26699459
|
[37] |
Rost B R, Schneider F, Rosenmund C , et al. Optogenetic acidification of synaptic vesicles and lysosomes. Nature Neuroscience, 2015,18(12):1845-1852.
doi: 10.1038/nn.4161
pmid: 4869830
|
[38] |
Valluru L, Xu J, Swanson G T , et al, . Ligand binding is a critical requirement for plasma membrane expression of heteromeric kainate receptors. The Journal of Biological Chemistry, 2005,280(7):6085-6093.
doi: 10.1074/jbc.M411549200
pmid: 15583001
|
[39] |
Suzuki A, de la Pompa J L, Mak T W , et al. High cancer susceptibility and embryonic lethality associated with mutation of the PTEN tumor suppressor gene in mice. Current Biology, 1998,8(21):1169-1178.
doi: 10.1016/S0960-9822(07)00488-5
pmid: 9799734
|
[40] |
Zhu P, Narita Y, Friedrich R W , et al. Optogenetic dissection of neuronal circuits in zebrafish using viral gene transfer and the Tet system. Frontiers in Neural Circuits, 2009,3(1):21-22.
doi: 10.3389/neuro.04.021.2009
|
[41] |
Jiang W, Hua R, Zhang C , et al. An optimized method for high-titer lentivirus preparations without ultracentrifugation. Scientific Reports, 2015,5(1):13875.
doi: 10.1038/srep13875
|
[42] |
Wold W S M, Toth K . Adenovirus vectors for gene therapy, vaccination and cancer gene therapy. Current Gene Therapy, 2013,13(6):421-33.
doi: 10.2174/1566523213666131125095046
pmid: 24279313
|
[43] |
Neve R L, Lim F . Generation of high-titer defective HSV-1 vectors. Current Protocols in Neuroscience, 2013, doi: 10.1002/0471142301.ns0413s62.
doi: 10.1002/0471142301.ns0413s62
|
[44] |
Mattis J, Brill J, Huguenard J R , et al. Frequency-dependent, cell type-divergent signaling in the hippocamposeptal projection. Journal of Neuroscience, 2014,34(35):11769-11780.
doi: 10.1523/JNEUROSCI.5188-13.2014
pmid: 25164672
|
[45] |
Lammel S, Steinberg E, Malenka R C , et al. Diversity of transgenic mouse models for selective targeting of midbrain dopamine neurons. Neuron, 2015,85(2):429-438.
doi: 10.1016/j.neuron.2014.12.036
pmid: 25611513
|
[46] |
Fenno L E, Mattis J, Deisseroth K , et al. Targeting cells with single vectors using multiple-feature Boolean logic. Nature Methods, 2014,11(7):763-772.
doi: 10.1038/nmeth.2996
pmid: 24908100
|
[47] |
Jefferis G, Livet J . Sparse and combinatorial neuron labelling. Current Opinion in Neurobiology, 2012,22(1):101-110.
doi: 10.1016/j.conb.2011.09.010
pmid: 22030345
|
[48] |
Soudais C, Laplace C, Kissa K , et al. Preferential transduction of neurons by canine adeno virus vectors and their efficient retrograde transport in vivo. Faseb Journal Official Publication of the Federation of American Societies for Experimental Biology, 2001,15(12):2283.
doi: 10.1096/fj.01-0321fje
pmid: 11511531
|
[49] |
Schwarz L A, Miyamichi K, Luo L , et al. Viral-genetic tracing of the input-output organization of a central noradrenaline circuit. Nature, 2015,524(7563):88-92.
doi: 10.1038/nature14600
pmid: 26131933
|
[50] |
Reardon T R, Murray A J, Losonczy A , et al. Rabies virus CVS-N2cδG strain enhances retrograde synaptic transfer and neuronal viability. Neuron, 2016,89(4):711-724.
doi: 10.1016/j.neuron.2016.01.004
pmid: 26804990
|
[51] |
Enquist L W . Exploiting circuit-specific spread of pseudorabies virus in the central nervous system: insights to pathogenesis and circuit tracers. The Journal of Infectious Diseases, 2002, 186,Suppl(s2):S209-S214.
doi: 10.1086/344278
pmid: 12424699
|
[52] |
Lo L, Anderson D J . A cre-dependent, anterograde transsynaptic viral tracer for mapping output pathways of genetically marked neurons. Neuron, 2011,72(6):938-950.
doi: 10.1016/j.neuron.2011.12.002
pmid: 22196330
|
[53] |
McGovern A E, Davis N, Mazzone S B , et al. Transneuronal tracing of airways-related sensory circuitry using herpes simplex virus 1, strain H129. Neuroscience, 2012,207:148-166.
doi: 10.1016/j.neuroscience.2012.01.029
pmid: 22306285
|
[54] |
Zingg B, Chou X, Zhang L , et al. AAV-mediated anterograde transsynaptic tagging: mapping corticocollicular input-defined neural pathways for defense behaviors. Neuron, 2017,93(1):33-47.
doi: 10.1016/j.neuron.2016.11.045
pmid: 27989459
|
[55] |
Lammel S, Tye K M, Warden M R . Progress in understanding mood disorders: optogenetic dissection of neural circuits. Genes, Brain and Behavior, 2014,13(1):38-51.
|
[56] |
Yaroslavsky A N, Schulze P C, Schwarzmaier H J , et al. Optical properties of selected native and coagulated human brain tissues in vitro in the visible and near infrared spectral range. Physics in Medicine and Biology. 2002,47(12):2059-2073.
|
[57] |
Zorzos A N, Scholvin J, Fonstad C G , et al. Three-dimensional multi-wave guide probe array for light delivery to distributed brain circuits. Optics Letters, 2012,37(23):4841.
doi: 10.1364/OL.37.004841
pmid: 23202064
|
[58] |
Abaya T V F, Blair S, Solzbacher F , et al. A 3D glass optrode array for optical neural stimulation. Biomedical Optics Express, 2012,3(12):3087.
doi: 10.1364/BOE.3.003087
pmid: 23243561
|
[59] |
Leonardo S, Marco P, Andrea D P , et al. Optical fiber technologies for in-vivo light delivery and optogenetics. International Conference on Transparent Optical Networks IEEE, 2015,DOI: 10.1109/ICTON.2015.7193312.
doi: 10.1109/ICTON.2015.7193312
|
[60] |
Royer S , Zemelman B V. Magee J C , et al. Multi-array silicon probes with integrated optical fibers: light-assisted perturbation and recording of local neural circuits in the behaving animal. European Journal of Neuroscience, 2010,31(12):2279-2291.
doi: 10.1111/j.1460-9568.2010.07250.x
pmid: 20529127
|
[61] |
Lee J H, Durand R, Deisseroth K , et al. Global and local fMRI signals driven by neurons defined optogenetically by type and wiring. Nature, 2010,465(7299):788-792.
doi: 10.1038/nature09108
|
[62] |
Shemesh O A, Tanese D, Zampini V , et al. Temporally precise single-cell-resolution optogenetics. Nature Neuroscience, 2017,20(12):1796-1806.
doi: 10.1038/s41593-017-0018-8
pmid: 29184208
|
[63] |
Cho K A, Sohal V S . Optogenetic approaches for investigating neural pathways implicated in schizophrenia and related disorders. Human Molecular Genetics, 2014,23(R1):R64-R68.
doi: 10.1093/hmg/ddu225
|
[64] |
Nyns E C A, Kip A, Pijnappels D A , et al. Optogenetic termination of ventricular arrhythmias in the whole heart: towards biological cardiac rhythm management. European Heart Journal, 2017,38(27):2132-2136.
doi: 10.1093/eurheartj/ehw574
pmid: 28011703
|
[65] |
Bruegmann T, Van T, Sasse P , et al. Optogenetic control of contractile function in skeletal muscle. Nature Communications, 2015,6(1):7153.
doi: 10.1038/ncomms8153
|
[66] |
Häusser M . Optogenetics: The age of light. Nature Methods, 2014. 11(10):1012-1014.
doi: 10.1038/nmeth.3111
|
[67] |
Kravitz A V, Bonci A . Optogenetics, physiology, and emotions. Frontiers in Behavioral Neuroscience, 2013,7(4):169.
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