Please wait a minute...

中国生物工程杂志

CHINA BIOTECHNOLOGY
中国生物工程杂志  2016, Vol. 36 Issue (5): 59-67    DOI: 10.13523/j.cb.20160509
研究报告     
Aeromonas sp. XJ-6双加氧酶基因的克隆、表达及对酪氨酸的降解
杨杨1, 杨江科2, 熊炜2, 梁建芳1, 段魏魏1, 晁群芳1
1. 新疆大学生命科学与技术学院 乌鲁木齐 830046;
2. 武汉轻工大学生物工程与制药学院 武汉 430023
Cloning and Expression of Dioxygenase Gene from Aeromonas sp. XJ-6 and Promoting Degradation of Tyr
YANG Yang1, YANG Jiang-ke2, XIONG Wei2, LIANG Jian-fang1, DUAN Wei-wei1, CHAO Qun-fang1
1. College of Life Science and Technology, Xinjiang University, Urumqi 830046, China;
2. School of Biology and Pharmaceutical Engineering, Wuhan Polytechnic University, Wuhan 430023, China
 全文: PDF(2650 KB)   HTML
摘要:

目的:从Aeromonas sp. XJ-6中克隆双加氧酶基因,初步探索该酶的功能,为芳香烃化合物的生物降解提供基因资源。方法:PCR扩增双加氧酶基因dio6,并实现该基因在大肠杆菌(Escherichia coli)中的诱导表达。产物经Ni-NTA柱纯化后,通过薄层层析(TLC)和HPLC检测双加氧酶dio6对Tyr的降解效果,再结合LC-MS检测降解产物,并分析其可能的降解途径。结果:Aeromonas sp. XJ-6双加氧酶基因dio6大小为1194bp;通过金属鳌合亲和层析(MCAC)纯化后dio6表达产物的大小为44.9kDa。双加氧酶dio6对Tyr具有较强的降解作用。TLC和HPLC检测表明,在60μl酶量和30℃反应温度等条件下,Tyr降解较快;Mg2+、Ca2+略微抑制酶促反应,Mn2+、Zn2+、Cu2+、Fe2+、Ca2+促进底物降解,其中Mn2+对双加氧酶影响最大。LC-MS分析表明,在双加氧酶dio6作用下,Tyr被降解为延胡索酸。结论:Aeromonas sp. XJ-6双加氧酶dio6是一种苯环开环酶,为芳香烃化合物的生物降解提供了良好的基因资源。

关键词: LC-MS纯化双加氧酶苯环HPLC    
Abstract:

Objective:To clone the dioxygenase dio6 gene from Aeromonas sp. XJ-6, and explore the function of dioxygenase dio6 to provide genetic resources for biodegradation of aromatic compounds. Methods:Dioxygenase dio6 gene from Aeromonas sp.XJ-6 genome was amplified by PCR and induciblly expressed in Escherichia coli BL21(DE3). The expression products of dio6 was purified by Ni-NTA.TLC and HPLC to detect the degradation effect of dioxygenase on Tyr, and the degradation products were also detected by LC-MS so as to analyze the possible degradation pathway. Results:The size of Aeromonas sp. XJ-6 dioxygenase gene dio6 was 1194bp, the expression product of dio6 purified by MCAC was 44.9kDa. HPLC analysis showed that dio6 has strong degradation ability for Tyr under the optimal conditions that the amount of enzyme is 60μl per reaction mixture, temperature 30℃.Metal ion Mg2+ and Ca2+ slightly inhibit the enzymatic reaction, and Mn2+、Zn2+、Cu2+、Fe2+ and Ca2+ can improve the substrate degradation, of which Mn2+ has the most impact on dioxygenase dio6. LC-MS analysis results showed that Tyr was turned into fumaric acid with the help of dioxygenase dio6. Conclusion:Aeromonas sp. XJ-6 dioxygenase dio6 is a kind of benzene ring-opening enzyme, which may be provided as a genetic resource for aromatic compounds biodegradation.

Key words: Purification    Benzene ring    LC-MS    HPLC    Dioxygenas
收稿日期: 2015-11-30 出版日期: 2016-01-04
ZTFLH:  Q554+.7  
基金资助:

国家自然科学基金资助项目(31460027)

通讯作者: 晁群芳     E-mail: xjchqf317@sina.com
服务  
把本文推荐给朋友
加入引用管理器
E-mail Alert
RSS
作者相关文章  
杨杨
杨江科
熊炜
梁建芳
段魏魏
晁群芳

引用本文:

杨杨, 杨江科, 熊炜, 梁建芳, 段魏魏, 晁群芳. Aeromonas sp. XJ-6双加氧酶基因的克隆、表达及对酪氨酸的降解[J]. 中国生物工程杂志, 2016, 36(5): 59-67.

YANG Yang, YANG Jiang-ke, XIONG Wei, LIANG Jian-fang, DUAN Wei-wei, CHAO Qun-fang. Cloning and Expression of Dioxygenase Gene from Aeromonas sp. XJ-6 and Promoting Degradation of Tyr. China Biotechnology, 2016, 36(5): 59-67.

链接本文:

https://manu60.magtech.com.cn/biotech/CN/10.13523/j.cb.20160509        https://manu60.magtech.com.cn/biotech/CN/Y2016/V36/I5/59

[1] 林颖,蔡容华. 芳香族化合物生物降解的研究进展. 福建轻纺,2006,(201):6-10. Lin Y,Cai R H. Biodegradation of aromatic compounds research advances. The Light&TextiIe Industries of Fujian,2006,2(201):6-10.
[2] Yao L,Teng Y,Luo Y,et al. Biodegradation of polycyclic aromatic hydrocarbons(PAHs) by Trichoderma reesei FS10-C and effect of bioaugmentation on an aged PAH-contaminated soil. Bioremediation Journal,2015,19:9-17.
[3] 王蕾,聂麦茜,杨学福,等. 高效芘降解细菌的筛选、鉴定及其基本特性研究. 西安建筑科技大学学报(自然科学版),2011,43(6):859-863. Wang L,Nie M Q,Yang X F,et al. Study on the efficient pyrene degrading bacteria screening,Identification and basic characteristics. Journal of Xi'an University of Architecture & Technology(Natural Science Edition),2011,43(6):859-863.
[4] Sàágua M C,Baeta-Hall L,Anselmo A M. Microbiological characterization of a coke oven contaminated site and evaluation of its potential for bioremediation. World Journal of Microbiology & Biotechnology,2002,18:841-845.
[5] 殷波,顾继东. 环境污染物萘、蒽、菲、芘的好氧微生物降解. 热带海洋学报,2005,24(4):14-21. Yin B,Gu J D. Environmental pollutants naphthalene,anthracene,phenanthrene,pyrene aerobic microbial degradation. Journal of Tropical Oceanography,2005,24(4):14-21.
[6] Silva A S,Jacques R J,Andreazza R,et al. Properties of catechol-1,2-dioxygenase in the cell free extract and immobilized extract of Mycobacterium fortuitum. Brazilian Journal of Microbiology,2013,44(1):291-297.
[7] 曹晓星,田蕴,胡忠,等. PAHs降解基因及降解酶研究进展. 生态学杂志,2007,26(6):917-924. Cao X X,Tian Y,Hu Z,et al. Research progress in PAHs degradation genes and enzymes. Chinese Journal of Ecology,2007,26(6):917-924.
[8] Alley J F,Brown L R. Use of sublimation to prepare solid microbial media with water-insoluble substrates. Applied Environmental Microbiology,2000,66(1):439-442.
[9] 李哲斐,孙然,简利茹,等. 一株耐碱性芘降解菌的筛选及特性研究. 西北农业学报,2011,20(12):140-144. Li Z H,Sun R,Jian L R,et al. Isolation and characterization of alkali resistance PAHs-degradation bacteria. Acta Agriculturae Boreali-occidentalis Sinica,2011,20(12):140-144.
[10] 付敏杰,聂尧,穆晓清,等. 新型异亮氨酸双加氧酶及其重组大肠杆菌合成羟基异亮氨酸.化工进展,2014,33(11):3037-3044. Fu M J,Nie Y,Mu X Q,et al. A novel isoleucine dioxygenase and its expression in recombinant Escherichia coli for synthesis of 4-hydroxyisoleucine. Chemical Industry and Engineering Progress,2014,33(11):3037-3044.
[11] Larentis A L,Argondizzo A P,Esteves Gdos S,et al. Cloning and optimization of induction conditions for mature PsaA(pneumococcal surface adhesin A) expression in Escherichia coli and recombinant protein stability during long-term storage. Protein Expression and Purification,2011,78(1):38-47.
[12] Sarker S,Ghorashi S A,Swarbrick G M,et al. An efficient approach for recombinant expression and purification of the viral capsid protein from beak and feather disease virus (BFDV) in Escherichia coli. Journal of Virological Methods,2015,215-216:1-8.
[13] Feng M J,Fu T M,Liu X,et al. Purification,crystallization and preliminary Crystallographic analysis of SMU.1108c protein from Streptococcus mutans. Crystallization Communications,2010,67(Pt 1):76-78.
[14] Mo X M,Li Y,Tang A G,et al. Simultaneous determination of phenylalanine and tyrosine in peripheral capillary blood by HPLC with ultraviolet detection. Clinical Biochemistry,2013,46(12):1074-1078.
[15] Khan F,Kumari M,Cameotra S S. Biodegradation of the allelopathic chemical m-Tyrosine by Bacillus aquimaris SSC5 involves the homogentisate central pathway. PLoS One,2013,8(10):1-10.
[16] 曲冬梅,弓爱君,高鹤永,等. 反相高效液相色谱法直接检测芳香族氨基酸. 氨基酸和生物资源, 2004,26(1):71-73. Qu D M,Gong A J,Gao H Y,et al. Direct detection of aromatic amino acids by RP-HPLC. Amino Acids & Biotic Resources,2004,26(1):71-73.
[17] 刘涛,张长铠,薛勇,等. L68菌株邻苯二酚-2,3-双加氧酶纯化及性质. 食品与生物技术,2002,21(1):53-57. Liu T,Zhang C K,Xue Y,et al. Purification and proterties of catechol 2,3-dioxygenase from strian L68. Journal of Food Science and Biotechnology,2002,21(1):53-57.
[18] 吴学军,谢能咏,刘勇. 薄层层析法分离六种氨基酸. 江汉大学学报(社会科学版),1999,16(6):11-13. Wu X J,Xie N Y,Liu Y. TLC separation of six amino acids. Journal of Jianghan University,1999,16(6):11-13.
[19] Andrensek S,Golc-Wondra A,Prosek M. Determination of phenylalanine and tyrosine by liquid chromatography/mass spectrometry. Food Composition and Additives,2003,86(4):753-758.
[20] Afzal M,Al-Awadhi S,Oommen S. L-phenylalanine and L-tyrosine catabolism by thermophilic Geobacillus stearothermophilus. British Biotechnology Journal,2013,3(4):581-591.
[21] Zhou G,Dudgeon C,Li M,et al. Molecular cloning of the HGD gene and association of SNPs with meat quality traits in Chinese red cattle. Molecular Biology Reports,2010,37(1):603-611.
[22] Sarthi S G P,Shyamashree B,Kumar B A. Sequence,structural and functional characterization of homogentisate-1,2-dioxygenase of homo sapiens:An in silico analysis. American Journal of Bioinformatics Research,2013,3(3):42-61.
[23] Sanchez-Amat A,Ruzafa G,Solano F. Comparative tyrosine degradation in Vibrio cholerae strains.The strain ATCC 14035 as a prokaryotic melanogenic model of homogentisate-releasing cell. Comparative Biochemistry and Physiology,1998,119(3):557-562.

[1] 张玲,曹小丹,杨海旭,李文蕾. 连续流层析技术在亲和层析中的应用及生产放大评估[J]. 中国生物工程杂志, 2021, 41(6): 38-44.
[2] 吕一凡,李更东,薛楠,吕国梁,时邵辉,王春生. LbCpf1基因的原核表达、纯化与体外切割检测 *[J]. 中国生物工程杂志, 2020, 40(8): 41-48.
[3] 蒋丹丹,王云龙,李玉林,张怡青. 含RGD修饰的病毒样颗粒递送ICG靶向肿瘤的研究 *[J]. 中国生物工程杂志, 2020, 40(7): 22-29.
[4] 谢航航,白红妹,叶超,陈永俊,袁明翠,马雁冰. 易发生聚集的重组HBcAg病毒样颗粒的纯化*[J]. 中国生物工程杂志, 2020, 40(5): 40-47.
[5] 位薇,常保根,王英,路福平,刘夫锋. Tau蛋白核心片段306~378的异源表达、纯化及聚集特性验证*[J]. 中国生物工程杂志, 2020, 40(5): 22-29.
[6] 刘珍珍,田大勇. 狂犬病疫苗蔗糖密度梯度离心纯化工艺开发 *[J]. 中国生物工程杂志, 2020, 40(4): 25-33.
[7] 朱彤彤,杨磊,刘应保,孙文秀,张修国. 辣椒疫霉PcCRN20-C蛋白的表达纯化及结晶 *[J]. 中国生物工程杂志, 2020, 40(1-2): 116-123.
[8] 潘炳菊,张宛怡,申会涛,刘婷婷,李中媛,罗学刚,宋亚囝. 甘露寡糖分离纯化研究进展*[J]. 中国生物工程杂志, 2020, 40(11): 90-95.
[9] 谢玉锋,韩雪梅,路福平. 副干酪乳杆菌β-葡糖苷酶的表达、纯化及酶学性质研究 *[J]. 中国生物工程杂志, 2019, 39(5): 72-79.
[10] 付大伟,孙莹莹,徐伟. 融合蛋白NusA-hRI的高效异源表达、纯化及活性分析[J]. 中国生物工程杂志, 2019, 39(3): 21-28.
[11] 景佳美,徐欣,王敏,彭如超,施一. 沙粒病毒聚合酶C端的表达纯化与结晶条件筛选 *[J]. 中国生物工程杂志, 2019, 39(12): 18-23.
[12] 朱梦露,王雪雨,刘鑫,路福平,孙登岳,秦慧民. 一种新型亮氨酸5-羟化酶NmLEH的异源表达、纯化及酶学性质分析 *[J]. 中国生物工程杂志, 2019, 39(12): 24-34.
[13] 童超迪,吴坚平,杨立荣,徐刚. X射线衍射晶体法解析脱卤酶DehDIV-R结构的研究 *[J]. 中国生物工程杂志, 2018, 38(8): 19-25.
[14] 陈军军,娄颖,张元兴,刘琴,刘晓红. 增殖细胞核抗原蛋白在Spodoptera frugiperda昆虫细胞中的表达及纯化 *[J]. 中国生物工程杂志, 2018, 38(7): 14-20.
[15] 李庆猛,李盛陶,王宁,高晓冬. 酵母来源α-1,2甘露糖转移酶Alg11的异源表达、纯化和活性分析 *[J]. 中国生物工程杂志, 2018, 38(6): 26-33.