研究报告 |
|
|
|
|
flg22诱导的拟南芥转录组分析及芥子油苷代谢途径的变化 |
于欣鑫, 高晋君, 李勇, 李晶 |
东北农业大学 农业生物功能基因重点实验室 哈尔滨 150030 |
|
Transcriptome Analysis of Arabidopsis thaliana and Changes of Glucosinolates Metabolism Pathway Induced by Flg22 |
YU Xin-xin, GAO Jin-jun, LI Yong, LI Jing |
Northeast Agricultural University, Key Laboratory of Agricultural Biological Functional Genes, Harbin 150030, China |
引用本文:
于欣鑫, 高晋君, 李勇, 李晶. flg22诱导的拟南芥转录组分析及芥子油苷代谢途径的变化[J]. 中国生物工程杂志, 2014, 34(5): 30-38.
YU Xin-xin, GAO Jin-jun, LI Yong, LI Jing. Transcriptome Analysis of Arabidopsis thaliana and Changes of Glucosinolates Metabolism Pathway Induced by Flg22. China Biotechnology, 2014, 34(5): 30-38.
链接本文:
https://manu60.magtech.com.cn/biotech/CN/10.13523/j.cb.20140505
或
https://manu60.magtech.com.cn/biotech/CN/Y2014/V34/I5/30
|
[1] Jones J D G, Dangl J L. The plant immune system. Nature, 2006,444(7117) : 323-329.
[2] Aziz A, Heyraud A, Lambert B. Oligogalacturonide signal transduction, induction of defense-related responses and protection of grapevine against Botrytis cinerea. Planta, 2004, 218(5): 767-774.
[3] Ferrari S, Galletti R, Denoux C, et al. Resistance to Botrytis cinerea induced in Arabidopsis by elicitors is independent of salicylic acid, ethylene, or jasmonate signaling but requires Phytoalexin Deficient3. Plant physiology, 2007, 144(1): 367-379.
[4] Zipfel C, Robatzek S, Navarro L, et al. Bacterial disease resistance in Arabidopsis through flagellin perception. Nature, 2004, 428(6984): 764-767.
[5] Felix G, Duran J D, Volko S, et al. Plants have a sensitive perception system for the most conserved domain of bacterial flagellin. The Plant Journal, 1999, 18(3): 265-276.
[6] Gómez-Gómez L, Boller T. FLS2: An LRR receptor-like kinase involved in the perception of the bacterial elicitor flagellin in Arabidopsis. Molecular cell, 2000, 5(6): 1003-1011.
[7] Chinchilla D, Bauer Z, Regenass M, et al. The Arabidopsis receptor kinase FLS2 binds flg22 and determines the specificity of flagellin perception. The Plant Cell Online, 2006, 18(2): 465-476.
[8] Chinchilla D, Zipfel C, Robatzek S, et al. A flagellin-induced complex of the receptor FLS2 and BAK1 initiates plant defence. Nature, 2007, 448(7152): 497-500.
[9] Bari R, Jones J D G. Role of plant hormones in plant defence responses. Plant molecular biology, 2009, 69(4): 473-488.
[10] Asai T, Tena G, Plotnikova J, et al. MAP kinase signalling cascade in Arabidopsis innate immunity. Nature, 2002, 415(6875): 977-983.
[11] Mikkelsen M D, Petersen B L, Glawischnig E, et al. Modulation of CYP79 genes and glucosinolate profiles in Arabidopsis by defense signaling pathways. Plant Physiology, 2003, 131(1): 298-308.
[12] Yan X, Chen S. Regulation of plant glucosinolate metabolism. Planta, 2007, 226(6): 1343-1352.
[13] Clay N K, Adio A M, Denoux C, et al. Glucosinolate metabolites required for an Arabidopsis innate immune response. Science, 2009, 323(5910): 95-101.
[14] Agerbirk N, De Vos M, Kim J H, et al. Indole glucosinolate breakdown and its biological effects. Phytochemistry Reviews, 2009, 8(1): 101-120.
[15] Mikkelsen M D, Petersen B L, Olsen C E, et al. Biosynthesis and metabolic engineering of glucosinolates. Amino Acids, 2002, 22(3): 279-295.
[16] Langmead B, Trapnell C, Po PM, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol, 2009, 10(3): R25
[17] Trapnell C, Pachter L, Salzberg S L. TopHat: discovering splice junctions with RNA-Seq. Bioinformatics, 2009, 25(9): 1105-1111.
[18] Anders S, Huber W. Differential expression of RNA-Seq data at the gene level-the DESeq package. 2012.
[19] Mikkelsen M D, Petersen B L, Glawischnig E, et al. Modulation of CYP79 genes and glucosinolate profiles in Arabidopsis by defense signaling pathways. Plant Physiology, 2003, 131(1): 298-308.
[20] Mldrup M E, Geu-Flores F, Halkier B A. Assigning gene function in biosynthetic pathways: Camalexin and beyond. The Plant Cell Online, 2013, 25(2): 360-367.
[21] Pfalz M, Vogel H, Kroymann J. The gene controlling the indole glucosinolate modifier1 quantitative trait locus alters indole glucosinolate structures and aphid resistance in Arabidopsis. The Plant Cell Online, 2009, 21(3): 985-999.
[22] Zhou N, Tootle T L, Glazebrook J. Arabidopsis PAD3 , a gene required for camalexin biosynthesis, encodes a putative cytochrome P450 monooxygenase. The Plant Cell Online, 1999, 11(12): 2419-2428.
[23] Mao G, Meng X, Liu Y, et al. Phosphorylation of a WRKY transcription factor by two pathogen-responsive MAPKs drives phytoalexin biosynthesis in Arabidopsis. The Plant Cell Online, 2011, 23(4): 1639-1653.
[24] Nafisi M, Snderby I E, Hansen B G, et al. Cytochromes P450 in the biosynthesis of glucosinolates and indole alkaloids. Phytochemistry reviews, 2006, 5(2-3): 331-346.
|
|
Viewed |
|
|
|
Full text
|
|
|
|
|
Abstract
|
|
|
|
|
Cited |
|
|
|
|
|
Shared |
|
|
|
|
|
Discussed |
|
|
|
|