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中国生物工程杂志

CHINA BIOTECHNOLOGY
中国生物工程杂志  2020, Vol. 40 Issue (1-2): 116-123    DOI: 10.13523/j.cb.1906036
技术与方法     
辣椒疫霉PcCRN20-C蛋白的表达纯化及结晶 *
朱彤彤1,杨磊1,刘应保1,孙文秀1,**(),张修国2
1 长江大学生命科学学院 荆州 434000
2 山东农业大学植物保护学院 泰安 271018
Purification and Crystallization of PcCRN20-C from Phytophthora capsici
ZHU Tong-tong1,YANG Lei1,LIU Ying-bao1,SUN Wen-xiu1,**(),ZHANG Xiu-guo2
1 College of Life Science,Yangtze University,Jingzhou 434000,China
2 College of Plant Protection,Shandong Agricultural University,Tai’an 271018,China
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摘要:

CRN(crinkling and necrosis-inducing protein)为疫霉菌在与寄主互作过程中分泌的一类特有胞质效应因子,干扰寄主细胞正常的生理代谢和功能。采用PCR法从辣椒疫霉LT1534菌株cDNA中克隆PcCRN20-C基因。该基因序列长783bp,编码261个氨基酸。构建重组表达载体,并转化大肠杆菌BL21(DE3)。在优化条件下诱导表达重组蛋白,利用Ni-NTA金属螯合层析、离子交换层析、分子筛层析和胰蛋白酶酶解技术获得高纯目的蛋白,SDS-PAGE分析表明,蛋白质分子量约为25kDa。采用座滴气相扩散法进行晶体制备和筛选,成功获得了蛋白质晶体,并通过X-射线衍射仪收集了晶体衍射花样。结合蛋白质晶体学方法,获得了有衍射的辣椒疫霉PcCRN20-C蛋白晶体,为进一步研究CRN蛋白的结构与病原菌致病机制提供参考资料。

关键词: 辣椒疫霉皱缩坏死蛋白蛋白质纯化结晶X-射线衍射    
Abstract:

Crinkling and necrosis-inducing protein is a class of special secreted cytoplasmic protein when phytophthora occurs, which interferes with the normal physiological metabolism and function of host cells. However, the relationship between its three-dimensional structure and infection mechanisms need to be further studied. The sequence of PcCRN20-C was amplified by PCR from cDNA of Phytophthora capsici LT1534, which is 783bp in length and encodes 261 amino acids. The expression vector of pET-28a-MBP-PcCRN20-C was constructed and transformed to Escherichia coli BL21(DE3). The recombinant protein was induced under optimal condition, subsequently purified by nickel chelate affinity chromatography, ion-exchange chromatography, molecular-exclusion chromatography and trypsin hydrolysis technology. The product identified as a specific band of 25kDa by SDS-PAGE, which is the same as predicted. Subsequently, crystals were grown with the sitting-drop vapour-diffusion method and diffracted by X-ray. As a result, the crystals of CRN were obtained in a way of protein crystallography, which set a foundation for further study on the connect of CRN structure with function to analyze the pathogenic mechanism of P. capsici at the molecular level.

Key words: Phytophthora capsici    Crinkling and necrosis-inducing protein    Purification crystallization    X-ray diffraction
收稿日期: 2019-06-26 出版日期: 2020-03-27
ZTFLH:  S432.1  
基金资助: * 国家自然科学基金(31701573);湖北省教育厅科学研究计划重点项目(D20181302)
通讯作者: 孙文秀     E-mail: wenxiusun@163.com
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引用本文:

朱彤彤,杨磊,刘应保,孙文秀,张修国. 辣椒疫霉PcCRN20-C蛋白的表达纯化及结晶 *[J]. 中国生物工程杂志, 2020, 40(1-2): 116-123.

ZHU Tong-tong,YANG Lei,LIU Ying-bao,SUN Wen-xiu,ZHANG Xiu-guo. Purification and Crystallization of PcCRN20-C from Phytophthora capsici. China Biotechnology, 2020, 40(1-2): 116-123.

链接本文:

https://manu60.magtech.com.cn/biotech/CN/10.13523/j.cb.1906036        https://manu60.magtech.com.cn/biotech/CN/Y2020/V40/I1-2/116

图1  PCR扩增PcCRN20-C基因片段
图2  PcCRN20-C基因核苷酸及氨基酸序列
图3  SDS-PAGE检测PcCRN20-C蛋白亲和层析结果
图4  PcCRN20-C蛋白纯化结果
图5  PcCRN20-C纯化蛋白SDS-PAGE检测示意图
Protein name Accession No. gi|544068814 Totallon score 262
Crinker
(Phytophthora capsici)
Protein score 322
Protein score C.I.(%) 100
Totallon C.I.(%) 100
Calc.Mass

938.5458
938.5458
Obsrv.Mass

938.5627
938.5627
±da

0.017
0.017
±ppm

18
18
Start
Seq.
307
307
End
Seq.
313
313
Sequence

FEFVLKR
FEFVLKR
Ion
Score
19
19
C.I.(%)

96.86
96.86
995.5672 995.5881 0.021 21 305 312 GRFEFVLK 42 99.99
995.5672 995.5881 0.021 21 305 312 GRFEFVLK 42 99.99
1 505.8726 1 505.9283 0.056 37 271 283 LFFIAPILETVSR 83 100
1 505.8726 1 505.9283 0.056 37 271 283 LFFIAPILETVSR 83 100
1 661.9738 1 662.0414 0.068 41 270 283 RLFFIAPILETVSR 36 99.93
1 661.9738 1 662.0414 0.068 41 270 283 RLFFIAPILETVSR 36 99.93
2 110.0815 2 110.168 0.087 41 373 391 EHETVLPQANTIPSFEGLK 13 87.57
2 110.0815 2 110.168 0.087 41 373 391 EHETVLPQANTIPSFEGLK 13 87.57
2 365.251 2 365.3584 0.107 45 371 391 VREHETVLPQANTIPSFEGLK 70 100
2 365.251 2 365.3584 0.107 45 371 391 VREHETVLPQANTIPSFEGLK 70 100
表1  PcCRN20-C质谱检测结果
图6  不同条件PcCRN20-C蛋白结晶形态
图7  PcCRN20-C优化晶体及衍射花样
[1] Marshall J S, Wilkinson J M, Moore T , et al. Structure and expression of the genes encoding proteins resident in large peripheral vesicles of Phytophthora cinnamomi zoospores. Protoplasma, 2001,215(1-4):226-239.
[2] Franck P, Amselem J, Galiana E , et al. Gene identification in the oomycete pathogen Phytophthora parasitica during in vitro vegetative growth through expressed sequence tags. Fungal Genetics and Biology, 2005,42(7):611-623.
[3] Moy P, Qutob D, Chapman B P , et al. Patterns of gene expression upon infection of soybean plants by Phytophthora sojae. Molecular Plant-Microbe Interactions, 2004,17(10):1051-1062.
[4] Tyler B M . Molecular basis of recognition between Phytophthora pathogens and their hosts. Annual Review of Phytopathology, 2002,40(1):137-167.
[5] Wawra S, Belmonte R, Löbach L , et al. Secretion, delivery and function of oomycete effector proteins. Current Opinion in Microbiology, 2012,15(6):85-91.
[6] Oliva R, Win J, Raffaele S , et al. Recent developments in effector biology of filamentous plant pathogens. Cellular Microbiology, 2010,12(6):705-715.
[7] Torto T A . EST mining and functional expression assays identify extracellular effector proteins from the plant pathogen Phytophthora. Genome Research, 2003,13(7):1675-1685.
[8] Schornack S, Huitema E, Cano L M , et al. Ten things to know about oomycete effectors. Molecular Plant Pathology, 2009,10(6):795-803.
[9] Schornack S, Van Damme M, Bozkurt T O , et al. Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, 2010,107(40):17421-17426.
[10] Remco S, Julietta J, Howden A J M , et al. Identification and characterisation crn effectors in phytophthora capsici shows modularity and functional diversity. PLoS One, 2013,8(3):e59517.
[11] Shen D, Liu T, Ye W , et al. Gene duplication and fragment recombination drive functional diversification of a superfamily of cytoplasmic effectors in Phytophthora sojae. PLoS One, 2013; 8(7):e70036.
[12] Remco S, Howden A J M, Magdalena D C , et al. Characterization of cell death inducing Phytophthora capsici CRN effectors suggests diverse activities in the host nucleus. Frontiers in Plant Science, 2013,4:387.doi: 10.3389/fpls.2013.00529.
doi: 10.3389/fpls.2013.00529
[13] Baodian G, Haonan W, Bo Y , et al. Phytophthora sojae effector PsAvh240 inhibits secretion of a host immune aspartic protease to promote infection. Molecular Plant, 2019,12(4):552-564.
[14] Ottmann C, Luberacki B, Isabell K , et al. A common toxin fold mediates microbial attack and plant defense. Plant Signaling & Behavior, 2009,106(25):10359-10364.
[15] Erwin D C, Ribeiro O K . Phytophthora diseases worldwide. Phytophthora Diseases Worldwide, 1996,90(6):1092.
[16] Song T Q, Ma Z C, Shen D Y , et al. An oomycete CRN effector reprograms expression of plant HSP genes by targeting their promoters. PLoS Pathogens, 2015,11(12):e1005348.
[17] Schornack S, Van Damme M, Bozkurt T O , et al. Ancient class of translocated oomycete effectors targets the host nucleus. Proceedings of the National Academy of Sciences, 2010,107(40):17421-17426.
[18] Li Q, Zhang M, Shen D , et al. A Phytophthora sojae effector PsCRN63 forms homo-/hetero-dimers to suppress plant immunity via an inverted association manner. Scientific Reports, 2016,6(1):26951.
[19] Klock H E, Koesema E J, Knuth M W , et al. Combining the polymerase incomplete primer extension method for cloning and mutagenesis with microscreening to accelerate structural genomics efforts. Proteins, 2008,71(2):982-994.
[20] Sachdev D, Chirgwin J M . Fusions to maltose-binding protein: control of folding and solubility in protein purification. Methods in Enzymology, 2000,326(326):312-321.
[21] Chayen N E . Comparative studies of protein crystallization by vapour-diffusion and microbatch techniques. Acta Crystallographica Section D Biological Crystallography, 1998,54(Pt 1):8-15.
[22] Chayen N E, Boggon T J, Cassetta A , et al. Trends and challenges in experimental macromolecular crystallography. Quarterly Reviews of Biophysics, 1996,29(3):227-252.
[23] Gugliuzza A, Aceto M, Simone S , et al. Novel functional per-fluorinated membranes: suitable nucleating systems for protein crystallization. Desalination, 2006,199(1-3):200-203.
[24] Nallamsetty S, Austin B P, Penrose K J , et al. Gateway vectors for the production of combinatorially‐tagged His6㎝BP fusion proteins in the cytoplasm and periplasm of Escherichia coli. Protein Science, 2006,14(12):2964-2971.
[25] Nanev C N . How do crystal lattice contacts reveal protein crystallization mechanism. Crystal Research & Technology, 2008,43(9):914-920.
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