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中国生物工程杂志

CHINA BIOTECHNOLOGY
中国生物工程杂志  2024, Vol. 44 Issue (2/3): 76-84    DOI: 10.13523/j.cb.2306009
技术与方法     
指形龙隙蛛毒腺中抗凝活性多肽挖掘
黄彪,温巧,龙承波,谷陟欣*()
成都佩德生物医药有限公司 成都 610219
Discovery of Anticoagulant Active Peptides from the Venom Glands of the Draconarius digitusiformis
HUANG Biao,WEN Qiao,LONG Chenbo,GU Zhixin*()
Chengdu Pepbiomedical Co., Ltd., Chengdu 610219, China
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摘要:

目的: 有毒动物毒腺分泌大量结构多样和功能丰富的活性多肽,是多肽药物开发的天然宝库。目前仅有一小部分有毒动物活性多肽被研究,因此有必要建立一种更加高效的活性多肽挖掘方法。方法: 以指形龙隙蛛为研究对象,通过对毒腺样本进行转录组测序、数据分析与多肽挑选,多肽重组表达制备,体外活性筛选和动物模型体内活性评价等方法,进行抗凝活性多肽的开发。结果: 筛选到一种凝血因子Xa抑制剂PDBPE-001,多肽分子量为9 889.82 Da,由92个氨基酸残基组成,有4对二硫键。该多肽可通过重组表达的方式高效制备,对凝血因子 Xa的抑制活性呈浓度依赖性,其半抑制浓度约为0.807 μmol/L。在体内血栓模型中,30 mg/kg PDBPE-001能起到良好的抗血栓效果。结论: 首次从指形龙隙蛛中获得了一个新型Factor Xa抑制剂,为新型抗凝血药物开发提供了一个全新的先导多肽分子。

关键词: 有毒动物活性多肽凝血因子 Xa抗凝血药物    
Abstract:

Objective: The venom glands of toxic animals secrete a large number of structurally diverse and functionally rich active peptides, representing a natural treasure trove for peptide drug development. At present, only a small portion of the active peptides from toxic animals have been studied, so there is a need to establish a more efficient method of active peptide discovery. Methods: The anticoagulant peptides were developed by transcriptome sequencing, data analysis and polypeptide selection, peptide preparation by recombinant expression, in vitro activity screening, and in vivo activity evaluation in animal models of the Draconarius digitusiformis. Results: PDBPE-001, an inhibitor of coagulation Factor Xa, was screened. The peptide has a molecular weight of 9 889.82 Da, consisting of 92 amino acid residues and 4 pairs of disulfide bonds. This peptide can be efficiently prepared through recombinant expression, and its inhibitory activity against Factor Xa is concentration dependent, with an IC50 ~ 0.807 μmol/L. In the mouse thrombus model, 30 mg/kg of PDBPE-001 has a good anti-thrombotic effect. Conclusions: A novel Factor Xa inhibitor has been obtained for the first time from the Draconarius digitusiformis, providing a new lead peptide molecule for the development of new anticoagulants.

Key words: Toxic animals    Active peptides    Factor Xa    Anticoagulants
收稿日期: 2023-06-05 出版日期: 2024-04-03
ZTFLH:  Q514+.3  
通讯作者: *电子信箱:guzhixin1@pdbio.com.cn   
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黄彪
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引用本文:

黄彪, 温巧, 龙承波, 谷陟欣. 指形龙隙蛛毒腺中抗凝活性多肽挖掘[J]. 中国生物工程杂志, 2024, 44(2/3): 76-84.

HUANG Biao, WEN Qiao, LONG Chenbo, GU Zhixin. Discovery of Anticoagulant Active Peptides from the Venom Glands of the Draconarius digitusiformis. China Biotechnology, 2024, 44(2/3): 76-84.

链接本文:

https://manu60.magtech.com.cn/biotech/CN/10.13523/j.cb.2306009        https://manu60.magtech.com.cn/biotech/CN/Y2024/V44/I2/3/76

图1  毒腺转录组序列分析流程
序列名称 序列 功能 分子量/Da 二硫键
PDBPE-001 CKSFIYGGCGGNGNSYSTEEECMEHCGDVLNESTVGTCEQPREA
GPCRAFMISYFFNKSTGKCEEFVYGGCKGNSNNFKSSEECAQTC
GQSA
丝氨酸蛋白酶抑制剂 9 889.82 4
PDBPE-002 DKCEEFVFGGCQGNGNNFNTVEECKQKC 丝氨酸蛋白酶抑制剂 3 457.78 2
PDBPE-003 CMQPAVSGLCLAYFPSWYYNPSTENCQTFMYGGWRKC 丝氨酸蛋白酶抑制剂 4 633.29 2
PDBPE-004 CGCYHMFGYLKSGCKCVVGTSSEFQGICRSKSKCPNS 电压门控钙通道的拮抗剂 4 302.84 3
PDBPE-005 DCEYPPETGDCSALFYRYYFNGEKCEEFVYGGCGANPNNFKTEE
ECMESC
丝氨酸蛋白酶抑制剂,对胰蛋白酶具有强活性(700 IU/mg),对纤溶酶具有中等抑制活性 6 068.57 3
表1  5条候选多肽的结构及功能预测信息
图2  重组表达质粒PDBPE-001-PET-32a(+)的构建
图3  重组表达质粒PDBPE-001-PET-32a(+)的鉴定 M道:10 kb ladder;泳道1:PDBPE-001质粒泳道;泳道2:Mlu l和Hind III消化的PDBPE-001质粒
图4  多肽PDBPE-001的重组表达 A: 重组多肽PDBPE-001的高效液相色谱分析 B:重组多肽PDBPE-001的SDS-PAGE鉴定。 泳道1:细菌破碎上清液;泳道2:融合蛋白PDBPE-001;泳道3:融合蛋白PDBPE-001的酶切 C: 重组多肽PDBPE-001的质谱鉴定
序列名称 抑制常数/(nmol/L)
凝血酶 激肽释放酶 Factor Xa Factor XIa
PDBPE-001 NIa NIa NIa 120
PDBPE-002 NIa 962 NIa NIa
PDBPE-003 874 NIa NIa NIa
PDBPE-004 NIa NIa NIa NIa
PDBPE-005 NIa NIa NIa NIa
表2  5条候选多肽对凝血酶、激肽释放酶、Factor XIa和Factor Xa的抑制作用
图5  多肽PDBPE-001活性评价结果 A: 不同浓度PDBPE-001对Factor Xa的抑制作用 B: PDBPE-001对Factor Xa的IC50
图6  体内抗血栓的药效评价 A: 角叉菜胶处理24 h后不同处理组的黑尾图像 B: 角叉菜胶处理后24 h不同处理组黑尾长度图 C:角叉菜胶处理前24 h不同治疗组黑尾比例
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